Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.31■□□□□ 0.2
Col10a1Q05306 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.31■□□□□ 0.2
Col10a1Q05306 Mir2861-201ENSMUST00000175539 82 ntBASIC16.31■□□□□ 0.2
Col10a1Q05306 Mir6349-201ENSMUST00000184059 97 ntBASIC16.31■□□□□ 0.2
Col10a1Q05306 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col10a1Q05306 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col10a1Q05306 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col10a1Q05306 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.31■□□□□ 0.2
Col10a1Q05306 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col10a1Q05306 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col10a1Q05306 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.3■□□□□ 0.2
Col10a1Q05306 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col10a1Q05306 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col10a1Q05306 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col10a1Q05306 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col10a1Q05306 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.3■□□□□ 0.2
Col10a1Q05306 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.3■□□□□ 0.2
Col10a1Q05306 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col10a1Q05306 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.3■□□□□ 0.2
Col10a1Q05306 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col10a1Q05306 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.3■□□□□ 0.2
Col10a1Q05306 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Col10a1Q05306 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col10a1Q05306 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col10a1Q05306 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col10a1Q05306 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col10a1Q05306 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Col10a1Q05306 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.29■□□□□ 0.2
Col10a1Q05306 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col10a1Q05306 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col10a1Q05306 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Col10a1Q05306 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.29■□□□□ 0.2
Col10a1Q05306 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.29■□□□□ 0.2
Col10a1Q05306 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.29■□□□□ 0.2
Col10a1Q05306 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col10a1Q05306 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.29■□□□□ 0.2
Col10a1Q05306 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col10a1Q05306 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col10a1Q05306 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.29■□□□□ 0.2
Col10a1Q05306 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col10a1Q05306 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.29■□□□□ 0.2
Col10a1Q05306 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col10a1Q05306 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.28■□□□□ 0.2
Col10a1Q05306 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.28■□□□□ 0.2
Col10a1Q05306 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col10a1Q05306 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col10a1Q05306 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Col10a1Q05306 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.27■□□□□ 0.2
Col10a1Q05306 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col10a1Q05306 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Col10a1Q05306 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.27■□□□□ 0.19
Col10a1Q05306 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Col10a1Q05306 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.26■□□□□ 0.19
Col10a1Q05306 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Gm22240-201ENSMUST00000175225 82 ntBASIC16.26■□□□□ 0.19
Col10a1Q05306 Gm10698-201ENSMUST00000182663 604 ntBASIC16.26■□□□□ 0.19
Col10a1Q05306 Gm42545-201ENSMUST00000202755 922 ntBASIC16.26■□□□□ 0.19
Col10a1Q05306 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.26■□□□□ 0.19
Col10a1Q05306 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms