Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rtl1Q7M732 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Rtl1Q7M732 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC31.75■■■□□ 2.67
Rtl1Q7M732 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rtl1Q7M732 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC31.75■■■□□ 2.67
Rtl1Q7M732 Gm10517-202ENSMUST00000192970 758 ntBASIC31.75■■■□□ 2.67
Rtl1Q7M732 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Rtl1Q7M732 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC31.74■■■□□ 2.67
Rtl1Q7M732 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Rtl1Q7M732 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Rtl1Q7M732 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Rtl1Q7M732 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Rtl1Q7M732 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
Rtl1Q7M732 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
Rtl1Q7M732 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Rtl1Q7M732 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Rtl1Q7M732 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Rtl1Q7M732 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC31.73■■■□□ 2.67
Rtl1Q7M732 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Rtl1Q7M732 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC31.72■■■□□ 2.67
Rtl1Q7M732 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Rtl1Q7M732 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC31.72■■■□□ 2.67
Rtl1Q7M732 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
Rtl1Q7M732 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
Rtl1Q7M732 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Rtl1Q7M732 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Rtl1Q7M732 Gm18959-201ENSMUST00000208954 655 ntBASIC31.72■■■□□ 2.67
Rtl1Q7M732 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC31.72■■■□□ 2.67
Rtl1Q7M732 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Rtl1Q7M732 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Rtl1Q7M732 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Rtl1Q7M732 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC31.71■■■□□ 2.67
Rtl1Q7M732 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Rtl1Q7M732 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Rtl1Q7M732 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rtl1Q7M732 Fst-202ENSMUST00000223640 2612 ntBASIC31.7■■■□□ 2.67
Rtl1Q7M732 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC31.7■■■□□ 2.67
Rtl1Q7M732 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rtl1Q7M732 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Rtl1Q7M732 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Rtl1Q7M732 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Rtl1Q7M732 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Rtl1Q7M732 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Rtl1Q7M732 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Gm9731-201ENSMUST00000209480 747 ntBASIC31.69■■■□□ 2.66
Rtl1Q7M732 Gm18032-201ENSMUST00000222541 538 ntBASIC31.69■■■□□ 2.66
Rtl1Q7M732 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtl1Q7M732 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Gm37025-201ENSMUST00000195159 829 ntBASIC31.68■■■□□ 2.66
Rtl1Q7M732 AC159205.6-201ENSMUST00000224935 887 ntBASIC31.68■■■□□ 2.66
Rtl1Q7M732 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rtl1Q7M732 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rtl1Q7M732 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rtl1Q7M732 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rtl1Q7M732 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC31.66■■■□□ 2.66
Rtl1Q7M732 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Gm27463-201ENSMUST00000183569 57 ntBASIC31.66■■■□□ 2.66
Rtl1Q7M732 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Rtl1Q7M732 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rtl1Q7M732 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms