Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Thumpd3P97770 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Thumpd3P97770 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.06■□□□□ 0.48
Thumpd3P97770 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd3P97770 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd3P97770 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd3P97770 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd3P97770 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.06■□□□□ 0.48
Thumpd3P97770 Nespas-201ENSMUST00000143738 1083 ntBASIC18.06■□□□□ 0.48
Thumpd3P97770 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.06■□□□□ 0.48
Thumpd3P97770 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd3P97770 Gm6365-201ENSMUST00000054711 744 ntBASIC18.06■□□□□ 0.48
Thumpd3P97770 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd3P97770 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Thumpd3P97770 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd3P97770 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Thumpd3P97770 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Gm12441-201ENSMUST00000121806 588 ntBASIC18.05■□□□□ 0.48
Thumpd3P97770 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.05■□□□□ 0.48
Thumpd3P97770 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.05■□□□□ 0.48
Thumpd3P97770 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Thumpd3P97770 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.05■□□□□ 0.48
Thumpd3P97770 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Thumpd3P97770 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.05■□□□□ 0.48
Thumpd3P97770 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd3P97770 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Thumpd3P97770 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Thumpd3P97770 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd3P97770 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.03■□□□□ 0.48
Thumpd3P97770 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.03■□□□□ 0.48
Thumpd3P97770 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Thumpd3P97770 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Thumpd3P97770 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.03■□□□□ 0.48
Thumpd3P97770 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.03■□□□□ 0.48
Thumpd3P97770 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Thumpd3P97770 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd3P97770 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd3P97770 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd3P97770 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd3P97770 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd3P97770 Gm13534-201ENSMUST00000121169 513 ntBASIC18.02■□□□□ 0.48
Thumpd3P97770 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Thumpd3P97770 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd3P97770 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.02■□□□□ 0.48
Thumpd3P97770 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd3P97770 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.02■□□□□ 0.48
Thumpd3P97770 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Thumpd3P97770 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Thumpd3P97770 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Thumpd3P97770 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Thumpd3P97770 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Thumpd3P97770 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Thumpd3P97770 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Thumpd3P97770 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd3P97770 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd3P97770 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd3P97770 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Thumpd3P97770 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd3P97770 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms