Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Gm29257-201ENSMUST00000186115 639 ntBASIC15.78■□□□□ 0.12
Trav10A0A075B642 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.78■□□□□ 0.12
Trav10A0A075B642 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav10A0A075B642 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav10A0A075B642 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav10A0A075B642 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav10A0A075B642 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav10A0A075B642 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav10A0A075B642 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav10A0A075B642 Gm2559-201ENSMUST00000201323 363 ntBASIC15.77■□□□□ 0.12
Trav10A0A075B642 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav10A0A075B642 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav10A0A075B642 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav10A0A075B642 Gm4968-201ENSMUST00000071458 858 ntBASIC15.77■□□□□ 0.12
Trav10A0A075B642 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav10A0A075B642 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav10A0A075B642 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav10A0A075B642 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav10A0A075B642 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav10A0A075B642 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav10A0A075B642 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.77■□□□□ 0.11
Trav10A0A075B642 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.76■□□□□ 0.11
Trav10A0A075B642 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Gm38285-201ENSMUST00000192928 922 ntBASIC15.76■□□□□ 0.11
Trav10A0A075B642 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Zfp783-201ENSMUST00000095946 670 ntBASIC15.76■□□□□ 0.11
Trav10A0A075B642 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav10A0A075B642 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.76■□□□□ 0.11
Trav10A0A075B642 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav10A0A075B642 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Gm12896-201ENSMUST00000118430 226 ntBASIC15.74■□□□□ 0.11
Trav10A0A075B642 Gm11927-201ENSMUST00000118472 759 ntBASIC15.74■□□□□ 0.11
Trav10A0A075B642 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav10A0A075B642 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trav10A0A075B642 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.73■□□□□ 0.11
Trav10A0A075B642 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav10A0A075B642 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav10A0A075B642 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 610.5 ms