Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Zcchc17Q9ESX4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Zcchc17Q9ESX4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Zcchc17Q9ESX4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.16■■■□□ 2.26
Zcchc17Q9ESX4 Gm11175-201ENSMUST00000116172 543 ntBASIC29.15■■■□□ 2.26
Zcchc17Q9ESX4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.15■■■□□ 2.26
Zcchc17Q9ESX4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
Zcchc17Q9ESX4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Zcchc17Q9ESX4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC29.13■■■□□ 2.25
Zcchc17Q9ESX4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Zcchc17Q9ESX4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Zcchc17Q9ESX4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Zcchc17Q9ESX4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Zcchc17Q9ESX4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.1■■■□□ 2.25
Zcchc17Q9ESX4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Zcchc17Q9ESX4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Zcchc17Q9ESX4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Zcchc17Q9ESX4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.08■■■□□ 2.25
Zcchc17Q9ESX4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Zcchc17Q9ESX4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.04■■■□□ 2.24
Zcchc17Q9ESX4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.04■■■□□ 2.24
Zcchc17Q9ESX4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Zcchc17Q9ESX4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Zcchc17Q9ESX4 Cap2-205ENSMUST00000225824 1634 ntBASIC28.99■■■□□ 2.23
Zcchc17Q9ESX4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Zcchc17Q9ESX4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.98■■■□□ 2.23
Zcchc17Q9ESX4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
Zcchc17Q9ESX4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
Zcchc17Q9ESX4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Zcchc17Q9ESX4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
Zcchc17Q9ESX4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.95■■■□□ 2.22
Zcchc17Q9ESX4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Zcchc17Q9ESX4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Zcchc17Q9ESX4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.91■■■□□ 2.22
Zcchc17Q9ESX4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Zcchc17Q9ESX4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
Zcchc17Q9ESX4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Zcchc17Q9ESX4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.89■■■□□ 2.22
Zcchc17Q9ESX4 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.89■■■□□ 2.21
Zcchc17Q9ESX4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Zcchc17Q9ESX4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Zcchc17Q9ESX4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Zcchc17Q9ESX4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.84■■■□□ 2.21
Zcchc17Q9ESX4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Zcchc17Q9ESX4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Zcchc17Q9ESX4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
Zcchc17Q9ESX4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Zcchc17Q9ESX4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Zcchc17Q9ESX4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Zcchc17Q9ESX4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Zcchc17Q9ESX4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Zcchc17Q9ESX4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.8■■■□□ 2.2
Zcchc17Q9ESX4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Zcchc17Q9ESX4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.79■■■□□ 2.2
Zcchc17Q9ESX4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Zcchc17Q9ESX4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Zcchc17Q9ESX4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Zcchc17Q9ESX4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Zcchc17Q9ESX4 Gm6311-201ENSMUST00000073790 878 ntBASIC28.78■■■□□ 2.2
Zcchc17Q9ESX4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
Zcchc17Q9ESX4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.77■■■□□ 2.2
Zcchc17Q9ESX4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.76■■■□□ 2.19
Zcchc17Q9ESX4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
Zcchc17Q9ESX4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Zcchc17Q9ESX4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.73■■■□□ 2.19
Zcchc17Q9ESX4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.72■■■□□ 2.19
Zcchc17Q9ESX4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Zcchc17Q9ESX4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Zcchc17Q9ESX4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Zcchc17Q9ESX4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Zcchc17Q9ESX4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Zcchc17Q9ESX4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Zcchc17Q9ESX4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Zcchc17Q9ESX4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Zcchc17Q9ESX4 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.66■■■□□ 2.18
Zcchc17Q9ESX4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.66■■■□□ 2.18
Zcchc17Q9ESX4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
Zcchc17Q9ESX4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.65■■■□□ 2.18
Zcchc17Q9ESX4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.65■■■□□ 2.18
Zcchc17Q9ESX4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Zcchc17Q9ESX4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Zcchc17Q9ESX4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.62■■■□□ 2.17
Zcchc17Q9ESX4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Zcchc17Q9ESX4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Zcchc17Q9ESX4 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.61■■■□□ 2.17
Zcchc17Q9ESX4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Zcchc17Q9ESX4 Particl-201ENSMUST00000205370 1560 ntBASIC28.61■■■□□ 2.17
Zcchc17Q9ESX4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Zcchc17Q9ESX4 Zxda-201ENSMUST00000117281 2621 ntBASIC28.6■■■□□ 2.17
Zcchc17Q9ESX4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Zcchc17Q9ESX4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Zcchc17Q9ESX4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Zcchc17Q9ESX4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Zcchc17Q9ESX4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Zcchc17Q9ESX4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Zcchc17Q9ESX4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Zcchc17Q9ESX4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Zcchc17Q9ESX4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Zcchc17Q9ESX4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Zcchc17Q9ESX4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms