Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cir1Q9DA19 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cir1Q9DA19 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cir1Q9DA19 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cir1Q9DA19 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cir1Q9DA19 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cir1Q9DA19 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cir1Q9DA19 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cir1Q9DA19 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cir1Q9DA19 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cir1Q9DA19 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cir1Q9DA19 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.65■□□□□ 0.9
Cir1Q9DA19 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cir1Q9DA19 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cir1Q9DA19 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cir1Q9DA19 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cir1Q9DA19 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cir1Q9DA19 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cir1Q9DA19 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cir1Q9DA19 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cir1Q9DA19 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cir1Q9DA19 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cir1Q9DA19 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cir1Q9DA19 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cir1Q9DA19 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cir1Q9DA19 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cir1Q9DA19 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cir1Q9DA19 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cir1Q9DA19 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cir1Q9DA19 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cir1Q9DA19 Mipep-204ENSMUST00000225043 1548 ntBASIC20.6■□□□□ 0.89
Cir1Q9DA19 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cir1Q9DA19 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cir1Q9DA19 Gm45855-201ENSMUST00000212546 880 ntBASIC20.59■□□□□ 0.89
Cir1Q9DA19 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cir1Q9DA19 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.58■□□□□ 0.89
Cir1Q9DA19 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Cir1Q9DA19 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cir1Q9DA19 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cir1Q9DA19 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cir1Q9DA19 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cir1Q9DA19 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cir1Q9DA19 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cir1Q9DA19 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cir1Q9DA19 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cir1Q9DA19 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.56■□□□□ 0.88
Cir1Q9DA19 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cir1Q9DA19 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.56■□□□□ 0.88
Cir1Q9DA19 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cir1Q9DA19 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cir1Q9DA19 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.54■□□□□ 0.88
Cir1Q9DA19 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cir1Q9DA19 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cir1Q9DA19 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cir1Q9DA19 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Cir1Q9DA19 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cir1Q9DA19 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cir1Q9DA19 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cir1Q9DA19 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cir1Q9DA19 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cir1Q9DA19 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Cir1Q9DA19 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cir1Q9DA19 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cir1Q9DA19 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cir1Q9DA19 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cir1Q9DA19 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.5■□□□□ 0.87
Cir1Q9DA19 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cir1Q9DA19 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cir1Q9DA19 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cir1Q9DA19 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cir1Q9DA19 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cir1Q9DA19 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cir1Q9DA19 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cir1Q9DA19 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cir1Q9DA19 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cir1Q9DA19 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cir1Q9DA19 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cir1Q9DA19 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cir1Q9DA19 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cir1Q9DA19 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cir1Q9DA19 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.46■□□□□ 0.87
Cir1Q9DA19 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cir1Q9DA19 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cir1Q9DA19 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cir1Q9DA19 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cir1Q9DA19 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cir1Q9DA19 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cir1Q9DA19 Gm9397-201ENSMUST00000200125 605 ntBASIC20.43■□□□□ 0.86
Cir1Q9DA19 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cir1Q9DA19 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cir1Q9DA19 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cir1Q9DA19 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cir1Q9DA19 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cir1Q9DA19 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cir1Q9DA19 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cir1Q9DA19 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cir1Q9DA19 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cir1Q9DA19 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cir1Q9DA19 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cir1Q9DA19 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms