Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Lrrc40Q9CRC8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Lrrc40Q9CRC8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lrrc40Q9CRC8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.2■■□□□ 1.46
Lrrc40Q9CRC8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Lrrc40Q9CRC8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.19■■□□□ 1.46
Lrrc40Q9CRC8 Zfp131-205ENSMUST00000223812 663 ntBASIC24.19■■□□□ 1.46
Lrrc40Q9CRC8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Lrrc40Q9CRC8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Lrrc40Q9CRC8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Lrrc40Q9CRC8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Lrrc40Q9CRC8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Lrrc40Q9CRC8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Lrrc40Q9CRC8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Lrrc40Q9CRC8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Lrrc40Q9CRC8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Lrrc40Q9CRC8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
Lrrc40Q9CRC8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Lrrc40Q9CRC8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Lrrc40Q9CRC8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Lrrc40Q9CRC8 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.12■■□□□ 1.45
Lrrc40Q9CRC8 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.11■■□□□ 1.45
Lrrc40Q9CRC8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Lrrc40Q9CRC8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lrrc40Q9CRC8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.1■■□□□ 1.45
Lrrc40Q9CRC8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Lrrc40Q9CRC8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.09■■□□□ 1.45
Lrrc40Q9CRC8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Lrrc40Q9CRC8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Lrrc40Q9CRC8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
Lrrc40Q9CRC8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lrrc40Q9CRC8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Lrrc40Q9CRC8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Lrrc40Q9CRC8 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.06■■□□□ 1.44
Lrrc40Q9CRC8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lrrc40Q9CRC8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Lrrc40Q9CRC8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.04■■□□□ 1.44
Lrrc40Q9CRC8 Gm9397-201ENSMUST00000200125 605 ntBASIC24.04■■□□□ 1.44
Lrrc40Q9CRC8 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.04■■□□□ 1.44
Lrrc40Q9CRC8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Lrrc40Q9CRC8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Lrrc40Q9CRC8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.03■■□□□ 1.44
Lrrc40Q9CRC8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lrrc40Q9CRC8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.02■■□□□ 1.44
Lrrc40Q9CRC8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.02■■□□□ 1.44
Lrrc40Q9CRC8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Lrrc40Q9CRC8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Lrrc40Q9CRC8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Lrrc40Q9CRC8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24■■□□□ 1.43
Lrrc40Q9CRC8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Lrrc40Q9CRC8 Gm24970-201ENSMUST00000175582 82 ntBASIC23.99■■□□□ 1.43
Lrrc40Q9CRC8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lrrc40Q9CRC8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.98■■□□□ 1.43
Lrrc40Q9CRC8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Lrrc40Q9CRC8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Lrrc40Q9CRC8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Lrrc40Q9CRC8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Lrrc40Q9CRC8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Lrrc40Q9CRC8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Lrrc40Q9CRC8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Lrrc40Q9CRC8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lrrc40Q9CRC8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Lrrc40Q9CRC8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.91■■□□□ 1.42
Lrrc40Q9CRC8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.91■■□□□ 1.42
Lrrc40Q9CRC8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Lrrc40Q9CRC8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Lrrc40Q9CRC8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Lrrc40Q9CRC8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Lrrc40Q9CRC8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.89■■□□□ 1.42
Lrrc40Q9CRC8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Lrrc40Q9CRC8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Lrrc40Q9CRC8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Lrrc40Q9CRC8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Lrrc40Q9CRC8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.89■■□□□ 1.41
Lrrc40Q9CRC8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Lrrc40Q9CRC8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lrrc40Q9CRC8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.87■■□□□ 1.41
Lrrc40Q9CRC8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lrrc40Q9CRC8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.87■■□□□ 1.41
Lrrc40Q9CRC8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lrrc40Q9CRC8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lrrc40Q9CRC8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Lrrc40Q9CRC8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.86■■□□□ 1.41
Lrrc40Q9CRC8 Gm45855-201ENSMUST00000212546 880 ntBASIC23.86■■□□□ 1.41
Lrrc40Q9CRC8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Lrrc40Q9CRC8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Lrrc40Q9CRC8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lrrc40Q9CRC8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Lrrc40Q9CRC8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lrrc40Q9CRC8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Lrrc40Q9CRC8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Lrrc40Q9CRC8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lrrc40Q9CRC8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lrrc40Q9CRC8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Lrrc40Q9CRC8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Lrrc40Q9CRC8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Lrrc40Q9CRC8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lrrc40Q9CRC8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lrrc40Q9CRC8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lrrc40Q9CRC8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms