Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rer1Q9CQU3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rer1Q9CQU3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.78■□□□□ 0.76
Rer1Q9CQU3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rer1Q9CQU3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rer1Q9CQU3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rer1Q9CQU3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rer1Q9CQU3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rer1Q9CQU3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rer1Q9CQU3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rer1Q9CQU3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rer1Q9CQU3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rer1Q9CQU3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rer1Q9CQU3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.75■□□□□ 0.75
Rer1Q9CQU3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rer1Q9CQU3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rer1Q9CQU3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rer1Q9CQU3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rer1Q9CQU3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rer1Q9CQU3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rer1Q9CQU3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rer1Q9CQU3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rer1Q9CQU3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rer1Q9CQU3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rer1Q9CQU3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rer1Q9CQU3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rer1Q9CQU3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rer1Q9CQU3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rer1Q9CQU3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rer1Q9CQU3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rer1Q9CQU3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rer1Q9CQU3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.69■□□□□ 0.74
Rer1Q9CQU3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Rer1Q9CQU3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rer1Q9CQU3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rer1Q9CQU3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rer1Q9CQU3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rer1Q9CQU3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rer1Q9CQU3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rer1Q9CQU3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rer1Q9CQU3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rer1Q9CQU3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rer1Q9CQU3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rer1Q9CQU3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rer1Q9CQU3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rer1Q9CQU3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rer1Q9CQU3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rer1Q9CQU3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rer1Q9CQU3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rer1Q9CQU3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rer1Q9CQU3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rer1Q9CQU3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rer1Q9CQU3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rer1Q9CQU3 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.61■□□□□ 0.73
Rer1Q9CQU3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.6■□□□□ 0.73
Rer1Q9CQU3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rer1Q9CQU3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rer1Q9CQU3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rer1Q9CQU3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rer1Q9CQU3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rer1Q9CQU3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rer1Q9CQU3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.56■□□□□ 0.72
Rer1Q9CQU3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rer1Q9CQU3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rer1Q9CQU3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rer1Q9CQU3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.55■□□□□ 0.72
Rer1Q9CQU3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rer1Q9CQU3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rer1Q9CQU3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rer1Q9CQU3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rer1Q9CQU3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rer1Q9CQU3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rer1Q9CQU3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rer1Q9CQU3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rer1Q9CQU3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rer1Q9CQU3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rer1Q9CQU3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rer1Q9CQU3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rer1Q9CQU3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rer1Q9CQU3 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.51■□□□□ 0.71
Rer1Q9CQU3 Zfp131-205ENSMUST00000223812 663 ntBASIC19.51■□□□□ 0.71
Rer1Q9CQU3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rer1Q9CQU3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rer1Q9CQU3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.49■□□□□ 0.71
Rer1Q9CQU3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rer1Q9CQU3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rer1Q9CQU3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rer1Q9CQU3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rer1Q9CQU3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.48■□□□□ 0.71
Rer1Q9CQU3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rer1Q9CQU3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Rer1Q9CQU3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rer1Q9CQU3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.46■□□□□ 0.71
Rer1Q9CQU3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rer1Q9CQU3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rer1Q9CQU3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rer1Q9CQU3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rer1Q9CQU3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.45■□□□□ 0.7
Rer1Q9CQU3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rer1Q9CQU3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms