Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61bQ9CQS8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61bQ9CQS8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61bQ9CQS8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61bQ9CQS8 Gm11599-201ENSMUST00000118720 878 ntBASIC13.06□□□□□ -0.32
Sec61bQ9CQS8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.06□□□□□ -0.32
Sec61bQ9CQS8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC13.06□□□□□ -0.32
Sec61bQ9CQS8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61bQ9CQS8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61bQ9CQS8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sec61bQ9CQS8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.02□□□□□ -0.33
Sec61bQ9CQS8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC13.02□□□□□ -0.33
Sec61bQ9CQS8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sec61bQ9CQS8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61bQ9CQS8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61bQ9CQS8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61bQ9CQS8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61bQ9CQS8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61bQ9CQS8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Sec61bQ9CQS8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sec61bQ9CQS8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61bQ9CQS8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61bQ9CQS8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61bQ9CQS8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61bQ9CQS8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61bQ9CQS8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61bQ9CQS8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sec61bQ9CQS8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61bQ9CQS8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC12.96□□□□□ -0.33
Sec61bQ9CQS8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61bQ9CQS8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61bQ9CQS8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61bQ9CQS8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61bQ9CQS8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61bQ9CQS8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61bQ9CQS8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61bQ9CQS8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sec61bQ9CQS8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC12.94□□□□□ -0.34
Sec61bQ9CQS8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61bQ9CQS8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
Sec61bQ9CQS8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC12.93□□□□□ -0.34
Sec61bQ9CQS8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61bQ9CQS8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61bQ9CQS8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sec61bQ9CQS8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC12.92□□□□□ -0.34
Sec61bQ9CQS8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61bQ9CQS8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sec61bQ9CQS8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 Gm6345-201ENSMUST00000180378 1691 ntBASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Sec61bQ9CQS8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sec61bQ9CQS8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sec61bQ9CQS8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC12.89□□□□□ -0.35
Sec61bQ9CQS8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sec61bQ9CQS8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sec61bQ9CQS8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC12.87□□□□□ -0.35
Sec61bQ9CQS8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61bQ9CQS8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61bQ9CQS8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61bQ9CQS8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sec61bQ9CQS8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms