Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl54Q9CPW3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl54Q9CPW3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl54Q9CPW3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl54Q9CPW3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.67■■□□□ 1.06
Mrpl54Q9CPW3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Mrpl54Q9CPW3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Mrpl54Q9CPW3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Mrpl54Q9CPW3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl54Q9CPW3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl54Q9CPW3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl54Q9CPW3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl54Q9CPW3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Mrpl54Q9CPW3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mrpl54Q9CPW3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mrpl54Q9CPW3 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.63■■□□□ 1.05
Mrpl54Q9CPW3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mrpl54Q9CPW3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mrpl54Q9CPW3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl54Q9CPW3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl54Q9CPW3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl54Q9CPW3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl54Q9CPW3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Mrpl54Q9CPW3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mrpl54Q9CPW3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Mrpl54Q9CPW3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Mrpl54Q9CPW3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.58■■□□□ 1.05
Mrpl54Q9CPW3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Mrpl54Q9CPW3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.57■■□□□ 1.04
Mrpl54Q9CPW3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mrpl54Q9CPW3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mrpl54Q9CPW3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Mrpl54Q9CPW3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.54■■□□□ 1.04
Mrpl54Q9CPW3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Mrpl54Q9CPW3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Mrpl54Q9CPW3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mrpl54Q9CPW3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mrpl54Q9CPW3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mrpl54Q9CPW3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mrpl54Q9CPW3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.48■■□□□ 1.03
Mrpl54Q9CPW3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mrpl54Q9CPW3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.48■■□□□ 1.03
Mrpl54Q9CPW3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Mrpl54Q9CPW3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mrpl54Q9CPW3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Mrpl54Q9CPW3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Mrpl54Q9CPW3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Mrpl54Q9CPW3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.45■■□□□ 1.02
Mrpl54Q9CPW3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Mrpl54Q9CPW3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mrpl54Q9CPW3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mrpl54Q9CPW3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mrpl54Q9CPW3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.44■■□□□ 1.02
Mrpl54Q9CPW3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mrpl54Q9CPW3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mrpl54Q9CPW3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Mrpl54Q9CPW3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mrpl54Q9CPW3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mrpl54Q9CPW3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Mrpl54Q9CPW3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Mrpl54Q9CPW3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mrpl54Q9CPW3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mrpl54Q9CPW3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mrpl54Q9CPW3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Mrpl54Q9CPW3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Mrpl54Q9CPW3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mrpl54Q9CPW3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Mrpl54Q9CPW3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.37■■□□□ 1.01
Mrpl54Q9CPW3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mrpl54Q9CPW3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mrpl54Q9CPW3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mrpl54Q9CPW3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Mrpl54Q9CPW3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mrpl54Q9CPW3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Mrpl54Q9CPW3 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.35■■□□□ 1.01
Mrpl54Q9CPW3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Mrpl54Q9CPW3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mrpl54Q9CPW3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mrpl54Q9CPW3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Mrpl54Q9CPW3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms