Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RtcbQ99LF4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
RtcbQ99LF4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.14■■■□□ 2.58
RtcbQ99LF4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.13■■■□□ 2.57
RtcbQ99LF4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.13■■■□□ 2.57
RtcbQ99LF4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RtcbQ99LF4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.12■■■□□ 2.57
RtcbQ99LF4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
RtcbQ99LF4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.11■■■□□ 2.57
RtcbQ99LF4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RtcbQ99LF4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.07■■■□□ 2.56
RtcbQ99LF4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
RtcbQ99LF4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RtcbQ99LF4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
RtcbQ99LF4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
RtcbQ99LF4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
RtcbQ99LF4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
RtcbQ99LF4 Cap2-205ENSMUST00000225824 1634 ntBASIC30.98■■■□□ 2.55
RtcbQ99LF4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RtcbQ99LF4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.97■■■□□ 2.55
RtcbQ99LF4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RtcbQ99LF4 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.93■■■□□ 2.54
RtcbQ99LF4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.93■■■□□ 2.54
RtcbQ99LF4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RtcbQ99LF4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
RtcbQ99LF4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RtcbQ99LF4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RtcbQ99LF4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RtcbQ99LF4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RtcbQ99LF4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RtcbQ99LF4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RtcbQ99LF4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30.89■■■□□ 2.54
RtcbQ99LF4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RtcbQ99LF4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RtcbQ99LF4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.88■■■□□ 2.53
RtcbQ99LF4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
RtcbQ99LF4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
RtcbQ99LF4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RtcbQ99LF4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
RtcbQ99LF4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RtcbQ99LF4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RtcbQ99LF4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RtcbQ99LF4 Gm6311-201ENSMUST00000073790 878 ntBASIC30.83■■■□□ 2.53
RtcbQ99LF4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RtcbQ99LF4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
RtcbQ99LF4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
RtcbQ99LF4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RtcbQ99LF4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.77■■■□□ 2.52
RtcbQ99LF4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RtcbQ99LF4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.76■■■□□ 2.51
RtcbQ99LF4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RtcbQ99LF4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RtcbQ99LF4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RtcbQ99LF4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RtcbQ99LF4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.73■■■□□ 2.51
RtcbQ99LF4 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.72■■■□□ 2.51
RtcbQ99LF4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.71■■■□□ 2.51
RtcbQ99LF4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
RtcbQ99LF4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
RtcbQ99LF4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
RtcbQ99LF4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
RtcbQ99LF4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.7■■■□□ 2.51
RtcbQ99LF4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RtcbQ99LF4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
RtcbQ99LF4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.69■■■□□ 2.5
RtcbQ99LF4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
RtcbQ99LF4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RtcbQ99LF4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RtcbQ99LF4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
RtcbQ99LF4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
RtcbQ99LF4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RtcbQ99LF4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.66■■■□□ 2.5
RtcbQ99LF4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
RtcbQ99LF4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
RtcbQ99LF4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RtcbQ99LF4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
RtcbQ99LF4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC30.64■■■□□ 2.5
RtcbQ99LF4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.63■■■□□ 2.49
RtcbQ99LF4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RtcbQ99LF4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
RtcbQ99LF4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
RtcbQ99LF4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RtcbQ99LF4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.6■■■□□ 2.49
RtcbQ99LF4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RtcbQ99LF4 Particl-201ENSMUST00000205370 1560 ntBASIC30.58■■■□□ 2.49
RtcbQ99LF4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RtcbQ99LF4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
RtcbQ99LF4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RtcbQ99LF4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
RtcbQ99LF4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
RtcbQ99LF4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RtcbQ99LF4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RtcbQ99LF4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RtcbQ99LF4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RtcbQ99LF4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RtcbQ99LF4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.53■■■□□ 2.48
RtcbQ99LF4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RtcbQ99LF4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.52■■■□□ 2.48
RtcbQ99LF4 Gm30023-201ENSMUST00000197970 889 ntBASIC30.52■■■□□ 2.48
RtcbQ99LF4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms