Protein–RNA interactions for Protein: Q99J38

Ttc30a1, Tetratricopeptide repeat protein 30A1, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc30a1Q99J38 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ttc30a1Q99J38 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ttc30a1Q99J38 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.61■■□□□ 1.53
Ttc30a1Q99J38 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.61■■□□□ 1.53
Ttc30a1Q99J38 Gm45855-201ENSMUST00000212546 880 ntBASIC24.6■■□□□ 1.53
Ttc30a1Q99J38 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ttc30a1Q99J38 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.6■■□□□ 1.53
Ttc30a1Q99J38 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Ttc30a1Q99J38 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ttc30a1Q99J38 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.58■■□□□ 1.53
Ttc30a1Q99J38 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.58■■□□□ 1.53
Ttc30a1Q99J38 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.57■■□□□ 1.52
Ttc30a1Q99J38 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Ttc30a1Q99J38 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.54■■□□□ 1.52
Ttc30a1Q99J38 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ttc30a1Q99J38 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ttc30a1Q99J38 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ttc30a1Q99J38 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ttc30a1Q99J38 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ttc30a1Q99J38 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ttc30a1Q99J38 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ttc30a1Q99J38 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Ttc30a1Q99J38 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.5■■□□□ 1.51
Ttc30a1Q99J38 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ttc30a1Q99J38 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ttc30a1Q99J38 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ttc30a1Q99J38 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ttc30a1Q99J38 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ttc30a1Q99J38 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Ttc30a1Q99J38 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.47■■□□□ 1.51
Ttc30a1Q99J38 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Ttc30a1Q99J38 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ttc30a1Q99J38 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.45■■□□□ 1.51
Ttc30a1Q99J38 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Ttc30a1Q99J38 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ttc30a1Q99J38 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ttc30a1Q99J38 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc30a1Q99J38 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc30a1Q99J38 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.44■■□□□ 1.5
Ttc30a1Q99J38 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc30a1Q99J38 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc30a1Q99J38 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc30a1Q99J38 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ttc30a1Q99J38 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc30a1Q99J38 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc30a1Q99J38 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc30a1Q99J38 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc30a1Q99J38 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc30a1Q99J38 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ttc30a1Q99J38 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ttc30a1Q99J38 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ttc30a1Q99J38 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Ttc30a1Q99J38 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc30a1Q99J38 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ttc30a1Q99J38 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ttc30a1Q99J38 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.39■■□□□ 1.49
Ttc30a1Q99J38 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ttc30a1Q99J38 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc30a1Q99J38 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Ttc30a1Q99J38 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
Ttc30a1Q99J38 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.37■■□□□ 1.49
Ttc30a1Q99J38 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.37■■□□□ 1.49
Ttc30a1Q99J38 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ttc30a1Q99J38 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ttc30a1Q99J38 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ttc30a1Q99J38 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Ttc30a1Q99J38 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ttc30a1Q99J38 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.35■■□□□ 1.49
Ttc30a1Q99J38 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ttc30a1Q99J38 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ttc30a1Q99J38 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ttc30a1Q99J38 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ttc30a1Q99J38 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ttc30a1Q99J38 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ttc30a1Q99J38 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ttc30a1Q99J38 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ttc30a1Q99J38 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ttc30a1Q99J38 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
Ttc30a1Q99J38 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ttc30a1Q99J38 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ttc30a1Q99J38 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ttc30a1Q99J38 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc30a1Q99J38 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc30a1Q99J38 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ttc30a1Q99J38 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ttc30a1Q99J38 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Ttc30a1Q99J38 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ttc30a1Q99J38 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ttc30a1Q99J38 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc30a1Q99J38 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc30a1Q99J38 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc30a1Q99J38 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc30a1Q99J38 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ttc30a1Q99J38 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ttc30a1Q99J38 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.26■■□□□ 1.47
Ttc30a1Q99J38 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ttc30a1Q99J38 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Ttc30a1Q99J38 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc30a1Q99J38 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc30a1Q99J38 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms