Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga6Q91XY2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga6Q91XY2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.03■■□□□ 1.44
Pcdhga6Q91XY2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga6Q91XY2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga6Q91XY2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhga6Q91XY2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhga6Q91XY2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhga6Q91XY2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhga6Q91XY2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.98■■□□□ 1.43
Pcdhga6Q91XY2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhga6Q91XY2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhga6Q91XY2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhga6Q91XY2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhga6Q91XY2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhga6Q91XY2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.96■■□□□ 1.43
Pcdhga6Q91XY2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhga6Q91XY2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.95■■□□□ 1.42
Pcdhga6Q91XY2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.94■■□□□ 1.42
Pcdhga6Q91XY2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcdhga6Q91XY2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga6Q91XY2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga6Q91XY2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga6Q91XY2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Pcdhga6Q91XY2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhga6Q91XY2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga6Q91XY2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga6Q91XY2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga6Q91XY2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.9■■□□□ 1.42
Pcdhga6Q91XY2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.9■■□□□ 1.42
Pcdhga6Q91XY2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga6Q91XY2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.9■■□□□ 1.42
Pcdhga6Q91XY2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga6Q91XY2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga6Q91XY2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Pcdhga6Q91XY2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.89■■□□□ 1.41
Pcdhga6Q91XY2 Gm6311-201ENSMUST00000073790 878 ntBASIC23.89■■□□□ 1.41
Pcdhga6Q91XY2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhga6Q91XY2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhga6Q91XY2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Pcdhga6Q91XY2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.88■■□□□ 1.41
Pcdhga6Q91XY2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhga6Q91XY2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga6Q91XY2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga6Q91XY2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Pcdhga6Q91XY2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhga6Q91XY2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdhga6Q91XY2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Pcdhga6Q91XY2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhga6Q91XY2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.83■■□□□ 1.41
Pcdhga6Q91XY2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.82■■□□□ 1.4
Pcdhga6Q91XY2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga6Q91XY2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga6Q91XY2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhga6Q91XY2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhga6Q91XY2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Pcdhga6Q91XY2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.79■■□□□ 1.4
Pcdhga6Q91XY2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.78■■□□□ 1.4
Pcdhga6Q91XY2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.77■■□□□ 1.4
Pcdhga6Q91XY2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.76■■□□□ 1.39
Pcdhga6Q91XY2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhga6Q91XY2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhga6Q91XY2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhga6Q91XY2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhga6Q91XY2 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.75■■□□□ 1.39
Pcdhga6Q91XY2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhga6Q91XY2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhga6Q91XY2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhga6Q91XY2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhga6Q91XY2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Pcdhga6Q91XY2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhga6Q91XY2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhga6Q91XY2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.72■■□□□ 1.39
Pcdhga6Q91XY2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhga6Q91XY2 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.71■■□□□ 1.39
Pcdhga6Q91XY2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhga6Q91XY2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhga6Q91XY2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhga6Q91XY2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.7■■□□□ 1.38
Pcdhga6Q91XY2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhga6Q91XY2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhga6Q91XY2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhga6Q91XY2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Pcdhga6Q91XY2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhga6Q91XY2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.68■■□□□ 1.38
Pcdhga6Q91XY2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhga6Q91XY2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga6Q91XY2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.67■■□□□ 1.38
Pcdhga6Q91XY2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga6Q91XY2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Pcdhga6Q91XY2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.67■■□□□ 1.38
Pcdhga6Q91XY2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Pcdhga6Q91XY2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhga6Q91XY2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhga6Q91XY2 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.64■■□□□ 1.37
Pcdhga6Q91XY2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhga6Q91XY2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Pcdhga6Q91XY2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga6Q91XY2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga6Q91XY2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms