Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhgb1Q91XX8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhgb1Q91XX8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhgb1Q91XX8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhgb1Q91XX8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhgb1Q91XX8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
Pcdhgb1Q91XX8 Nkain2-201ENSMUST00000092602 558 ntBASIC25.39■■□□□ 1.66
Pcdhgb1Q91XX8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhgb1Q91XX8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhgb1Q91XX8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.37■■□□□ 1.65
Pcdhgb1Q91XX8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.36■■□□□ 1.65
Pcdhgb1Q91XX8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhgb1Q91XX8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhgb1Q91XX8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhgb1Q91XX8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhgb1Q91XX8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Pcdhgb1Q91XX8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.31■■□□□ 1.64
Pcdhgb1Q91XX8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Pcdhgb1Q91XX8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhgb1Q91XX8 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.3■■□□□ 1.64
Pcdhgb1Q91XX8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.29■■□□□ 1.64
Pcdhgb1Q91XX8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
Pcdhgb1Q91XX8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhgb1Q91XX8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhgb1Q91XX8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhgb1Q91XX8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.26■■□□□ 1.63
Pcdhgb1Q91XX8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Pcdhgb1Q91XX8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhgb1Q91XX8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.25■■□□□ 1.63
Pcdhgb1Q91XX8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhgb1Q91XX8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhgb1Q91XX8 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.24■■□□□ 1.63
Pcdhgb1Q91XX8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgb1Q91XX8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgb1Q91XX8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.23■■□□□ 1.63
Pcdhgb1Q91XX8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgb1Q91XX8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Pcdhgb1Q91XX8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgb1Q91XX8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Pcdhgb1Q91XX8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
Pcdhgb1Q91XX8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.22■■□□□ 1.63
Pcdhgb1Q91XX8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.22■■□□□ 1.63
Pcdhgb1Q91XX8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhgb1Q91XX8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Pcdhgb1Q91XX8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhgb1Q91XX8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.19■■□□□ 1.62
Pcdhgb1Q91XX8 Zxda-201ENSMUST00000117281 2621 ntBASIC25.17■■□□□ 1.62
Pcdhgb1Q91XX8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Pcdhgb1Q91XX8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhgb1Q91XX8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhgb1Q91XX8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhgb1Q91XX8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.16■■□□□ 1.62
Pcdhgb1Q91XX8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhgb1Q91XX8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhgb1Q91XX8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhgb1Q91XX8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhgb1Q91XX8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhgb1Q91XX8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhgb1Q91XX8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.14■■□□□ 1.62
Pcdhgb1Q91XX8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhgb1Q91XX8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhgb1Q91XX8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhgb1Q91XX8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhgb1Q91XX8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhgb1Q91XX8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.13■■□□□ 1.61
Pcdhgb1Q91XX8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.12■■□□□ 1.61
Pcdhgb1Q91XX8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgb1Q91XX8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgb1Q91XX8 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.12■■□□□ 1.61
Pcdhgb1Q91XX8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhgb1Q91XX8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhgb1Q91XX8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.1■■□□□ 1.61
Pcdhgb1Q91XX8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.1■■□□□ 1.61
Pcdhgb1Q91XX8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhgb1Q91XX8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Pcdhgb1Q91XX8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgb1Q91XX8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgb1Q91XX8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgb1Q91XX8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgb1Q91XX8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgb1Q91XX8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhgb1Q91XX8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Pcdhgb1Q91XX8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.05■■□□□ 1.6
Pcdhgb1Q91XX8 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.05■■□□□ 1.6
Pcdhgb1Q91XX8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgb1Q91XX8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Pcdhgb1Q91XX8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhgb1Q91XX8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgb1Q91XX8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgb1Q91XX8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgb1Q91XX8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgb1Q91XX8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgb1Q91XX8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgb1Q91XX8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
Pcdhgb1Q91XX8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Pcdhgb1Q91XX8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgb1Q91XX8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgb1Q91XX8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgb1Q91XX8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgb1Q91XX8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms