Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgc3Q91XX1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgc3Q91XX1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgc3Q91XX1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Pcdhgc3Q91XX1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgc3Q91XX1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgc3Q91XX1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgc3Q91XX1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
Pcdhgc3Q91XX1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgc3Q91XX1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgc3Q91XX1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.78■■□□□ 1.24
Pcdhgc3Q91XX1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc3Q91XX1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Pcdhgc3Q91XX1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc3Q91XX1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Pcdhgc3Q91XX1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgc3Q91XX1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc3Q91XX1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.75■■□□□ 1.23
Pcdhgc3Q91XX1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc3Q91XX1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc3Q91XX1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc3Q91XX1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc3Q91XX1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc3Q91XX1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc3Q91XX1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc3Q91XX1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pcdhgc3Q91XX1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgc3Q91XX1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgc3Q91XX1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc3Q91XX1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc3Q91XX1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc3Q91XX1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgc3Q91XX1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Pcdhgc3Q91XX1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhgc3Q91XX1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhgc3Q91XX1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhgc3Q91XX1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhgc3Q91XX1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pcdhgc3Q91XX1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgc3Q91XX1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhgc3Q91XX1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhgc3Q91XX1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgc3Q91XX1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhgc3Q91XX1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc3Q91XX1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc3Q91XX1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhgc3Q91XX1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhgc3Q91XX1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgc3Q91XX1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgc3Q91XX1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhgc3Q91XX1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhgc3Q91XX1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.58■■□□□ 1.21
Pcdhgc3Q91XX1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhgc3Q91XX1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhgc3Q91XX1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgc3Q91XX1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.56■■□□□ 1.2
Pcdhgc3Q91XX1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Pcdhgc3Q91XX1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhgc3Q91XX1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgc3Q91XX1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhgc3Q91XX1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgc3Q91XX1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgc3Q91XX1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhgc3Q91XX1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgc3Q91XX1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhgc3Q91XX1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.52■■□□□ 1.2
Pcdhgc3Q91XX1 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.52■■□□□ 1.2
Pcdhgc3Q91XX1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhgc3Q91XX1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Pcdhgc3Q91XX1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgc3Q91XX1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhgc3Q91XX1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Pcdhgc3Q91XX1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhgc3Q91XX1 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.46■■□□□ 1.19
Pcdhgc3Q91XX1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgc3Q91XX1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgc3Q91XX1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Pcdhgc3Q91XX1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms