Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Trex1Q91XB0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Trex1Q91XB0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.55■■■□□ 2.16
Trex1Q91XB0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.55■■■□□ 2.16
Trex1Q91XB0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Trex1Q91XB0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Trex1Q91XB0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
Trex1Q91XB0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.16
Trex1Q91XB0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Trex1Q91XB0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Trex1Q91XB0 Gm7432-201ENSMUST00000210343 879 ntBASIC28.52■■■□□ 2.16
Trex1Q91XB0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.51■■■□□ 2.15
Trex1Q91XB0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.51■■■□□ 2.15
Trex1Q91XB0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Trex1Q91XB0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Trex1Q91XB0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.5■■■□□ 2.15
Trex1Q91XB0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Trex1Q91XB0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Trex1Q91XB0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Trex1Q91XB0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.48■■■□□ 2.15
Trex1Q91XB0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Trex1Q91XB0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Trex1Q91XB0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Trex1Q91XB0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Trex1Q91XB0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.43■■■□□ 2.14
Trex1Q91XB0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.43■■■□□ 2.14
Trex1Q91XB0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Trex1Q91XB0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.42■■■□□ 2.14
Trex1Q91XB0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Trex1Q91XB0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Trex1Q91XB0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
Trex1Q91XB0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Trex1Q91XB0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Trex1Q91XB0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Trex1Q91XB0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Trex1Q91XB0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Trex1Q91XB0 Gm11599-201ENSMUST00000118720 878 ntBASIC28.34■■■□□ 2.13
Trex1Q91XB0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Trex1Q91XB0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.34■■■□□ 2.13
Trex1Q91XB0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.33■■■□□ 2.13
Trex1Q91XB0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.12
Trex1Q91XB0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.32■■■□□ 2.12
Trex1Q91XB0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.32■■■□□ 2.12
Trex1Q91XB0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Trex1Q91XB0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Trex1Q91XB0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trex1Q91XB0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.3■■■□□ 2.12
Trex1Q91XB0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Trex1Q91XB0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trex1Q91XB0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Trex1Q91XB0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trex1Q91XB0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.27■■■□□ 2.12
Trex1Q91XB0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Trex1Q91XB0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Trex1Q91XB0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Trex1Q91XB0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Trex1Q91XB0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Trex1Q91XB0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Trex1Q91XB0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.25■■■□□ 2.11
Trex1Q91XB0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Trex1Q91XB0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Trex1Q91XB0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Trex1Q91XB0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.23■■■□□ 2.11
Trex1Q91XB0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Trex1Q91XB0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.22■■■□□ 2.11
Trex1Q91XB0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Trex1Q91XB0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Trex1Q91XB0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trex1Q91XB0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trex1Q91XB0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trex1Q91XB0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.2■■■□□ 2.11
Trex1Q91XB0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
Trex1Q91XB0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Trex1Q91XB0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Trex1Q91XB0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Trex1Q91XB0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.18■■■□□ 2.1
Trex1Q91XB0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Trex1Q91XB0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trex1Q91XB0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.17■■■□□ 2.1
Trex1Q91XB0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trex1Q91XB0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trex1Q91XB0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Trex1Q91XB0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Trex1Q91XB0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.15■■■□□ 2.1
Trex1Q91XB0 Gm30023-201ENSMUST00000197970 889 ntBASIC28.15■■■□□ 2.1
Trex1Q91XB0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Trex1Q91XB0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Trex1Q91XB0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Trex1Q91XB0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.12■■■□□ 2.09
Trex1Q91XB0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.11■■■□□ 2.09
Trex1Q91XB0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Trex1Q91XB0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trex1Q91XB0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trex1Q91XB0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trex1Q91XB0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.08■■■□□ 2.09
Trex1Q91XB0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Trex1Q91XB0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trex1Q91XB0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trex1Q91XB0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trex1Q91XB0 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.06■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms