Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H1fooQ8VIK3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H1fooQ8VIK3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H1fooQ8VIK3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H1fooQ8VIK3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
H1fooQ8VIK3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
H1fooQ8VIK3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
H1fooQ8VIK3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H1fooQ8VIK3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H1fooQ8VIK3 Zfp131-205ENSMUST00000223812 663 ntBASIC20.26■□□□□ 0.83
H1fooQ8VIK3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.25■□□□□ 0.83
H1fooQ8VIK3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H1fooQ8VIK3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.24■□□□□ 0.83
H1fooQ8VIK3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H1fooQ8VIK3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H1fooQ8VIK3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H1fooQ8VIK3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
H1fooQ8VIK3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H1fooQ8VIK3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.21■□□□□ 0.83
H1fooQ8VIK3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H1fooQ8VIK3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H1fooQ8VIK3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H1fooQ8VIK3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H1fooQ8VIK3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H1fooQ8VIK3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H1fooQ8VIK3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.19■□□□□ 0.82
H1fooQ8VIK3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H1fooQ8VIK3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
H1fooQ8VIK3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
H1fooQ8VIK3 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.17■□□□□ 0.82
H1fooQ8VIK3 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.17■□□□□ 0.82
H1fooQ8VIK3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
H1fooQ8VIK3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H1fooQ8VIK3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H1fooQ8VIK3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
H1fooQ8VIK3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H1fooQ8VIK3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
H1fooQ8VIK3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H1fooQ8VIK3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H1fooQ8VIK3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
H1fooQ8VIK3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
H1fooQ8VIK3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H1fooQ8VIK3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H1fooQ8VIK3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.13■□□□□ 0.81
H1fooQ8VIK3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H1fooQ8VIK3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.12■□□□□ 0.81
H1fooQ8VIK3 Gm9397-201ENSMUST00000200125 605 ntBASIC20.12■□□□□ 0.81
H1fooQ8VIK3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
H1fooQ8VIK3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H1fooQ8VIK3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
H1fooQ8VIK3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.11■□□□□ 0.81
H1fooQ8VIK3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.11■□□□□ 0.81
H1fooQ8VIK3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
H1fooQ8VIK3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H1fooQ8VIK3 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.1■□□□□ 0.81
H1fooQ8VIK3 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.1■□□□□ 0.81
H1fooQ8VIK3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.09■□□□□ 0.81
H1fooQ8VIK3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
H1fooQ8VIK3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
H1fooQ8VIK3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
H1fooQ8VIK3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
H1fooQ8VIK3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H1fooQ8VIK3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H1fooQ8VIK3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H1fooQ8VIK3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.07■□□□□ 0.8
H1fooQ8VIK3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
H1fooQ8VIK3 Gm24970-201ENSMUST00000175582 82 ntBASIC20.05■□□□□ 0.8
H1fooQ8VIK3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.05■□□□□ 0.8
H1fooQ8VIK3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
H1fooQ8VIK3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
H1fooQ8VIK3 Gm45855-201ENSMUST00000212546 880 ntBASIC20.04■□□□□ 0.8
H1fooQ8VIK3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H1fooQ8VIK3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H1fooQ8VIK3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
H1fooQ8VIK3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H1fooQ8VIK3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H1fooQ8VIK3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H1fooQ8VIK3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H1fooQ8VIK3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
H1fooQ8VIK3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H1fooQ8VIK3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.99■□□□□ 0.79
H1fooQ8VIK3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
H1fooQ8VIK3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.98■□□□□ 0.79
H1fooQ8VIK3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H1fooQ8VIK3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.97■□□□□ 0.79
H1fooQ8VIK3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
H1fooQ8VIK3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
H1fooQ8VIK3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.94■□□□□ 0.78
H1fooQ8VIK3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H1fooQ8VIK3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H1fooQ8VIK3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.94■□□□□ 0.78
H1fooQ8VIK3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H1fooQ8VIK3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H1fooQ8VIK3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H1fooQ8VIK3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H1fooQ8VIK3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H1fooQ8VIK3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
H1fooQ8VIK3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H1fooQ8VIK3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H1fooQ8VIK3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms