Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.07■■□□□ 1.6
Trim60Q8VI40 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Trim60Q8VI40 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Trim60Q8VI40 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim60Q8VI40 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trim60Q8VI40 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trim60Q8VI40 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
Trim60Q8VI40 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.04■■□□□ 1.6
Trim60Q8VI40 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trim60Q8VI40 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Trim60Q8VI40 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim60Q8VI40 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Trim60Q8VI40 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Trim60Q8VI40 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Trim60Q8VI40 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim60Q8VI40 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim60Q8VI40 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim60Q8VI40 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Trim60Q8VI40 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Trim60Q8VI40 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.98■■□□□ 1.59
Trim60Q8VI40 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Trim60Q8VI40 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Trim60Q8VI40 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Trim60Q8VI40 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim60Q8VI40 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Trim60Q8VI40 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim60Q8VI40 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.96■■□□□ 1.59
Trim60Q8VI40 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim60Q8VI40 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim60Q8VI40 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.93■■□□□ 1.58
Trim60Q8VI40 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trim60Q8VI40 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Trim60Q8VI40 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trim60Q8VI40 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trim60Q8VI40 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim60Q8VI40 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trim60Q8VI40 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim60Q8VI40 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Trim60Q8VI40 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Trim60Q8VI40 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.89■■□□□ 1.57
Trim60Q8VI40 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
Trim60Q8VI40 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim60Q8VI40 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim60Q8VI40 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim60Q8VI40 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.87■■□□□ 1.57
Trim60Q8VI40 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim60Q8VI40 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim60Q8VI40 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim60Q8VI40 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Trim60Q8VI40 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.82■■□□□ 1.56
Trim60Q8VI40 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Trim60Q8VI40 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim60Q8VI40 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim60Q8VI40 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim60Q8VI40 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim60Q8VI40 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Trim60Q8VI40 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim60Q8VI40 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim60Q8VI40 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim60Q8VI40 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim60Q8VI40 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim60Q8VI40 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim60Q8VI40 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim60Q8VI40 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim60Q8VI40 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim60Q8VI40 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim60Q8VI40 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Trim60Q8VI40 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Trim60Q8VI40 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Trim60Q8VI40 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Trim60Q8VI40 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Trim60Q8VI40 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim60Q8VI40 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim60Q8VI40 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim60Q8VI40 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim60Q8VI40 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim60Q8VI40 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim60Q8VI40 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim60Q8VI40 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Trim60Q8VI40 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Trim60Q8VI40 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim60Q8VI40 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim60Q8VI40 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.68■■□□□ 1.54
Trim60Q8VI40 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim60Q8VI40 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.67■■□□□ 1.54
Trim60Q8VI40 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim60Q8VI40 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Trim60Q8VI40 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Trim60Q8VI40 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim60Q8VI40 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim60Q8VI40 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim60Q8VI40 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms