Protein–RNA interactions for Protein: Q8VDN2

Atp1a1, Sodium/potassium-transporting ATPase subunit alpha-1, mousemouse

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp1a1Q8VDN2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Atp1a1Q8VDN2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Atp1a1Q8VDN2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Atp1a1Q8VDN2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Atp1a1Q8VDN2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.36■■□□□ 1.81
Atp1a1Q8VDN2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Atp1a1Q8VDN2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Atp1a1Q8VDN2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Atp1a1Q8VDN2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Atp1a1Q8VDN2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Atp1a1Q8VDN2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Atp1a1Q8VDN2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Atp1a1Q8VDN2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Atp1a1Q8VDN2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Atp1a1Q8VDN2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Atp1a1Q8VDN2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Atp1a1Q8VDN2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
Atp1a1Q8VDN2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Atp1a1Q8VDN2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Atp1a1Q8VDN2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atp1a1Q8VDN2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Atp1a1Q8VDN2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atp1a1Q8VDN2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Atp1a1Q8VDN2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Atp1a1Q8VDN2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atp1a1Q8VDN2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.27■■□□□ 1.8
Atp1a1Q8VDN2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atp1a1Q8VDN2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Atp1a1Q8VDN2 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.26■■□□□ 1.79
Atp1a1Q8VDN2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atp1a1Q8VDN2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Atp1a1Q8VDN2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Atp1a1Q8VDN2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.25■■□□□ 1.79
Atp1a1Q8VDN2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp1a1Q8VDN2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.23■■□□□ 1.79
Atp1a1Q8VDN2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Atp1a1Q8VDN2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.23■■□□□ 1.79
Atp1a1Q8VDN2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.22■■□□□ 1.79
Atp1a1Q8VDN2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Atp1a1Q8VDN2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Atp1a1Q8VDN2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atp1a1Q8VDN2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atp1a1Q8VDN2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atp1a1Q8VDN2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.17■■□□□ 1.78
Atp1a1Q8VDN2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.17■■□□□ 1.78
Atp1a1Q8VDN2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.17■■□□□ 1.78
Atp1a1Q8VDN2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Atp1a1Q8VDN2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Atp1a1Q8VDN2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Atp1a1Q8VDN2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Atp1a1Q8VDN2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Atp1a1Q8VDN2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Atp1a1Q8VDN2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Atp1a1Q8VDN2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Atp1a1Q8VDN2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atp1a1Q8VDN2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Atp1a1Q8VDN2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Atp1a1Q8VDN2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Atp1a1Q8VDN2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Atp1a1Q8VDN2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Atp1a1Q8VDN2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Atp1a1Q8VDN2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Atp1a1Q8VDN2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Atp1a1Q8VDN2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
Atp1a1Q8VDN2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Atp1a1Q8VDN2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Atp1a1Q8VDN2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Atp1a1Q8VDN2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Atp1a1Q8VDN2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.06■■□□□ 1.76
Atp1a1Q8VDN2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Atp1a1Q8VDN2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Atp1a1Q8VDN2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Atp1a1Q8VDN2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Atp1a1Q8VDN2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Atp1a1Q8VDN2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Atp1a1Q8VDN2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Atp1a1Q8VDN2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Atp1a1Q8VDN2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Atp1a1Q8VDN2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Atp1a1Q8VDN2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Atp1a1Q8VDN2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.01■■□□□ 1.75
Atp1a1Q8VDN2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Atp1a1Q8VDN2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26■■□□□ 1.75
Atp1a1Q8VDN2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Atp1a1Q8VDN2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Atp1a1Q8VDN2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
Atp1a1Q8VDN2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Atp1a1Q8VDN2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.99■■□□□ 1.75
Atp1a1Q8VDN2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.99■■□□□ 1.75
Atp1a1Q8VDN2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Atp1a1Q8VDN2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Atp1a1Q8VDN2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Atp1a1Q8VDN2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Atp1a1Q8VDN2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Atp1a1Q8VDN2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Atp1a1Q8VDN2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.96■■□□□ 1.75
Atp1a1Q8VDN2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Atp1a1Q8VDN2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
Atp1a1Q8VDN2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.95■■□□□ 1.74
Atp1a1Q8VDN2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms