Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf8Q8VC56 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf8Q8VC56 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Rnf8Q8VC56 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf8Q8VC56 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf8Q8VC56 Gm45855-201ENSMUST00000212546 880 ntBASIC23.08■■□□□ 1.29
Rnf8Q8VC56 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf8Q8VC56 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.08■■□□□ 1.29
Rnf8Q8VC56 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Rnf8Q8VC56 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf8Q8VC56 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf8Q8VC56 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.06■■□□□ 1.28
Rnf8Q8VC56 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf8Q8VC56 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf8Q8VC56 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf8Q8VC56 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf8Q8VC56 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf8Q8VC56 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf8Q8VC56 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf8Q8VC56 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf8Q8VC56 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf8Q8VC56 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf8Q8VC56 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Rnf8Q8VC56 Gm24970-201ENSMUST00000175582 82 ntBASIC22.99■■□□□ 1.27
Rnf8Q8VC56 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.99■■□□□ 1.27
Rnf8Q8VC56 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf8Q8VC56 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf8Q8VC56 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf8Q8VC56 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf8Q8VC56 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf8Q8VC56 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Rnf8Q8VC56 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf8Q8VC56 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf8Q8VC56 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf8Q8VC56 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf8Q8VC56 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf8Q8VC56 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf8Q8VC56 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf8Q8VC56 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf8Q8VC56 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf8Q8VC56 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.9■■□□□ 1.26
Rnf8Q8VC56 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.88■■□□□ 1.25
Rnf8Q8VC56 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.88■■□□□ 1.25
Rnf8Q8VC56 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf8Q8VC56 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.88■■□□□ 1.25
Rnf8Q8VC56 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf8Q8VC56 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf8Q8VC56 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Rnf8Q8VC56 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.86■■□□□ 1.25
Rnf8Q8VC56 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf8Q8VC56 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf8Q8VC56 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.85■■□□□ 1.25
Rnf8Q8VC56 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf8Q8VC56 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf8Q8VC56 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf8Q8VC56 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
Rnf8Q8VC56 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf8Q8VC56 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf8Q8VC56 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf8Q8VC56 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Rnf8Q8VC56 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Rnf8Q8VC56 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms