Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3kbp1Q8R550 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3kbp1Q8R550 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3kbp1Q8R550 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Sh3kbp1Q8R550 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.99■■□□□ 1.59
Sh3kbp1Q8R550 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.99■■□□□ 1.59
Sh3kbp1Q8R550 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.99■■□□□ 1.59
Sh3kbp1Q8R550 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Sh3kbp1Q8R550 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.98■■□□□ 1.59
Sh3kbp1Q8R550 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.98■■□□□ 1.59
Sh3kbp1Q8R550 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sh3kbp1Q8R550 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sh3kbp1Q8R550 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Sh3kbp1Q8R550 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.97■■□□□ 1.59
Sh3kbp1Q8R550 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.97■■□□□ 1.59
Sh3kbp1Q8R550 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Sh3kbp1Q8R550 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Sh3kbp1Q8R550 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Sh3kbp1Q8R550 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Sh3kbp1Q8R550 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sh3kbp1Q8R550 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
Sh3kbp1Q8R550 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sh3kbp1Q8R550 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Sh3kbp1Q8R550 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Sh3kbp1Q8R550 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Sh3kbp1Q8R550 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.9■■□□□ 1.58
Sh3kbp1Q8R550 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sh3kbp1Q8R550 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sh3kbp1Q8R550 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Sh3kbp1Q8R550 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.89■■□□□ 1.58
Sh3kbp1Q8R550 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Sh3kbp1Q8R550 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Sh3kbp1Q8R550 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Sh3kbp1Q8R550 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sh3kbp1Q8R550 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Sh3kbp1Q8R550 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Sh3kbp1Q8R550 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Sh3kbp1Q8R550 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.87■■□□□ 1.57
Sh3kbp1Q8R550 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.87■■□□□ 1.57
Sh3kbp1Q8R550 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Sh3kbp1Q8R550 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sh3kbp1Q8R550 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3kbp1Q8R550 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3kbp1Q8R550 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3kbp1Q8R550 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Sh3kbp1Q8R550 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sh3kbp1Q8R550 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sh3kbp1Q8R550 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.84■■□□□ 1.57
Sh3kbp1Q8R550 Nkain2-201ENSMUST00000092602 558 ntBASIC24.84■■□□□ 1.57
Sh3kbp1Q8R550 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3kbp1Q8R550 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3kbp1Q8R550 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3kbp1Q8R550 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.83■■□□□ 1.57
Sh3kbp1Q8R550 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.82■■□□□ 1.56
Sh3kbp1Q8R550 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sh3kbp1Q8R550 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sh3kbp1Q8R550 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3kbp1Q8R550 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3kbp1Q8R550 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3kbp1Q8R550 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sh3kbp1Q8R550 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sh3kbp1Q8R550 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sh3kbp1Q8R550 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.78■■□□□ 1.56
Sh3kbp1Q8R550 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Sh3kbp1Q8R550 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.78■■□□□ 1.56
Sh3kbp1Q8R550 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Sh3kbp1Q8R550 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Sh3kbp1Q8R550 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.77■■□□□ 1.56
Sh3kbp1Q8R550 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sh3kbp1Q8R550 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sh3kbp1Q8R550 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sh3kbp1Q8R550 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
Sh3kbp1Q8R550 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Sh3kbp1Q8R550 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sh3kbp1Q8R550 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
Sh3kbp1Q8R550 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Sh3kbp1Q8R550 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Sh3kbp1Q8R550 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sh3kbp1Q8R550 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sh3kbp1Q8R550 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Sh3kbp1Q8R550 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sh3kbp1Q8R550 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sh3kbp1Q8R550 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sh3kbp1Q8R550 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.7■■□□□ 1.54
Sh3kbp1Q8R550 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.7■■□□□ 1.54
Sh3kbp1Q8R550 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3kbp1Q8R550 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3kbp1Q8R550 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3kbp1Q8R550 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3kbp1Q8R550 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.68■■□□□ 1.54
Sh3kbp1Q8R550 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sh3kbp1Q8R550 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3kbp1Q8R550 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3kbp1Q8R550 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3kbp1Q8R550 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3kbp1Q8R550 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3kbp1Q8R550 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3kbp1Q8R550 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sh3kbp1Q8R550 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.64■■□□□ 1.54
Sh3kbp1Q8R550 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms