Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vmn1r38Q8R2E1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vmn1r38Q8R2E1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Vmn1r38Q8R2E1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vmn1r38Q8R2E1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vmn1r38Q8R2E1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Vmn1r38Q8R2E1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Vmn1r38Q8R2E1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vmn1r38Q8R2E1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vmn1r38Q8R2E1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vmn1r38Q8R2E1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vmn1r38Q8R2E1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vmn1r38Q8R2E1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Vmn1r38Q8R2E1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Vmn1r38Q8R2E1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vmn1r38Q8R2E1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vmn1r38Q8R2E1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vmn1r38Q8R2E1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Vmn1r38Q8R2E1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Vmn1r38Q8R2E1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Vmn1r38Q8R2E1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Vmn1r38Q8R2E1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
Vmn1r38Q8R2E1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.68■■□□□ 1.22
Vmn1r38Q8R2E1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Vmn1r38Q8R2E1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Vmn1r38Q8R2E1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
Vmn1r38Q8R2E1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vmn1r38Q8R2E1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Vmn1r38Q8R2E1 Gm24804-201ENSMUST00000174982 85 ntBASIC22.67■■□□□ 1.22
Vmn1r38Q8R2E1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vmn1r38Q8R2E1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Vmn1r38Q8R2E1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.67■■□□□ 1.22
Vmn1r38Q8R2E1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r38Q8R2E1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Vmn1r38Q8R2E1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r38Q8R2E1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r38Q8R2E1 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.66■■□□□ 1.22
Vmn1r38Q8R2E1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r38Q8R2E1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Vmn1r38Q8R2E1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Vmn1r38Q8R2E1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.64■■□□□ 1.22
Vmn1r38Q8R2E1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vmn1r38Q8R2E1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vmn1r38Q8R2E1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.63■■□□□ 1.21
Vmn1r38Q8R2E1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vmn1r38Q8R2E1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.63■■□□□ 1.21
Vmn1r38Q8R2E1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vmn1r38Q8R2E1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r38Q8R2E1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r38Q8R2E1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r38Q8R2E1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Vmn1r38Q8R2E1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r38Q8R2E1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Vmn1r38Q8R2E1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Vmn1r38Q8R2E1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Vmn1r38Q8R2E1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Vmn1r38Q8R2E1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vmn1r38Q8R2E1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vmn1r38Q8R2E1 Gm16148-201ENSMUST00000119653 893 ntBASIC22.59■■□□□ 1.21
Vmn1r38Q8R2E1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Vmn1r38Q8R2E1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Vmn1r38Q8R2E1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Vmn1r38Q8R2E1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vmn1r38Q8R2E1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vmn1r38Q8R2E1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vmn1r38Q8R2E1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vmn1r38Q8R2E1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vmn1r38Q8R2E1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.55■■□□□ 1.2
Vmn1r38Q8R2E1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vmn1r38Q8R2E1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vmn1r38Q8R2E1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.54■■□□□ 1.2
Vmn1r38Q8R2E1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r38Q8R2E1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r38Q8R2E1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.52■■□□□ 1.2
Vmn1r38Q8R2E1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r38Q8R2E1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r38Q8R2E1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r38Q8R2E1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.52■■□□□ 1.2
Vmn1r38Q8R2E1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vmn1r38Q8R2E1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Vmn1r38Q8R2E1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vmn1r38Q8R2E1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vmn1r38Q8R2E1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Vmn1r38Q8R2E1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Vmn1r38Q8R2E1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Vmn1r38Q8R2E1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vmn1r38Q8R2E1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vmn1r38Q8R2E1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r38Q8R2E1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Vmn1r38Q8R2E1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Vmn1r38Q8R2E1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Vmn1r38Q8R2E1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r38Q8R2E1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r38Q8R2E1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r38Q8R2E1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r38Q8R2E1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r38Q8R2E1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r38Q8R2E1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vmn1r38Q8R2E1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Vmn1r38Q8R2E1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms