Protein–RNA interactions for Protein: Q8CJ61

Cmtm4, CKLF-like MARVEL transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtm4Q8CJ61 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cmtm4Q8CJ61 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cmtm4Q8CJ61 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cmtm4Q8CJ61 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cmtm4Q8CJ61 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cmtm4Q8CJ61 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cmtm4Q8CJ61 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cmtm4Q8CJ61 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cmtm4Q8CJ61 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cmtm4Q8CJ61 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cmtm4Q8CJ61 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cmtm4Q8CJ61 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cmtm4Q8CJ61 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cmtm4Q8CJ61 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cmtm4Q8CJ61 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cmtm4Q8CJ61 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cmtm4Q8CJ61 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cmtm4Q8CJ61 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cmtm4Q8CJ61 Gm27322-201ENSMUST00000184007 104 ntBASIC20.78■□□□□ 0.92
Cmtm4Q8CJ61 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cmtm4Q8CJ61 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cmtm4Q8CJ61 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Cmtm4Q8CJ61 Gm26115-201ENSMUST00000175605 87 ntBASIC20.77■□□□□ 0.92
Cmtm4Q8CJ61 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cmtm4Q8CJ61 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cmtm4Q8CJ61 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cmtm4Q8CJ61 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.76■□□□□ 0.91
Cmtm4Q8CJ61 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.76■□□□□ 0.91
Cmtm4Q8CJ61 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cmtm4Q8CJ61 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cmtm4Q8CJ61 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cmtm4Q8CJ61 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cmtm4Q8CJ61 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Cmtm4Q8CJ61 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cmtm4Q8CJ61 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cmtm4Q8CJ61 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cmtm4Q8CJ61 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cmtm4Q8CJ61 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cmtm4Q8CJ61 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cmtm4Q8CJ61 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cmtm4Q8CJ61 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cmtm4Q8CJ61 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.68■□□□□ 0.9
Cmtm4Q8CJ61 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cmtm4Q8CJ61 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cmtm4Q8CJ61 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cmtm4Q8CJ61 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cmtm4Q8CJ61 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cmtm4Q8CJ61 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cmtm4Q8CJ61 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cmtm4Q8CJ61 Gm8109-201ENSMUST00000194076 746 ntBASIC20.65■□□□□ 0.9
Cmtm4Q8CJ61 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Cmtm4Q8CJ61 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cmtm4Q8CJ61 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cmtm4Q8CJ61 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cmtm4Q8CJ61 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cmtm4Q8CJ61 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.64■□□□□ 0.89
Cmtm4Q8CJ61 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Cmtm4Q8CJ61 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cmtm4Q8CJ61 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cmtm4Q8CJ61 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cmtm4Q8CJ61 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cmtm4Q8CJ61 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cmtm4Q8CJ61 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cmtm4Q8CJ61 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cmtm4Q8CJ61 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cmtm4Q8CJ61 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.6■□□□□ 0.89
Cmtm4Q8CJ61 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cmtm4Q8CJ61 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.6■□□□□ 0.89
Cmtm4Q8CJ61 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cmtm4Q8CJ61 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cmtm4Q8CJ61 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cmtm4Q8CJ61 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cmtm4Q8CJ61 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cmtm4Q8CJ61 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cmtm4Q8CJ61 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cmtm4Q8CJ61 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cmtm4Q8CJ61 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cmtm4Q8CJ61 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.58■□□□□ 0.88
Cmtm4Q8CJ61 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.57■□□□□ 0.88
Cmtm4Q8CJ61 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.57■□□□□ 0.88
Cmtm4Q8CJ61 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cmtm4Q8CJ61 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.56■□□□□ 0.88
Cmtm4Q8CJ61 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cmtm4Q8CJ61 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.55■□□□□ 0.88
Cmtm4Q8CJ61 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cmtm4Q8CJ61 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cmtm4Q8CJ61 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cmtm4Q8CJ61 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cmtm4Q8CJ61 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cmtm4Q8CJ61 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cmtm4Q8CJ61 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cmtm4Q8CJ61 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Cmtm4Q8CJ61 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cmtm4Q8CJ61 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cmtm4Q8CJ61 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cmtm4Q8CJ61 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cmtm4Q8CJ61 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cmtm4Q8CJ61 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cmtm4Q8CJ61 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cmtm4Q8CJ61 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms