Protein–RNA interactions for Protein: Q8CA09

Gm4894, Predicted gene 4894, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4894Q8CA09 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm4894Q8CA09 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.37■□□□□ 0.69
Gm4894Q8CA09 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm4894Q8CA09 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm4894Q8CA09 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm4894Q8CA09 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm4894Q8CA09 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm4894Q8CA09 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm4894Q8CA09 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm4894Q8CA09 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm4894Q8CA09 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm4894Q8CA09 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm4894Q8CA09 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm4894Q8CA09 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm4894Q8CA09 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm4894Q8CA09 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.33■□□□□ 0.68
Gm4894Q8CA09 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
Gm4894Q8CA09 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm4894Q8CA09 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm4894Q8CA09 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm4894Q8CA09 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm4894Q8CA09 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm4894Q8CA09 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm4894Q8CA09 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm4894Q8CA09 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.28■□□□□ 0.68
Gm4894Q8CA09 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm4894Q8CA09 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm4894Q8CA09 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm4894Q8CA09 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm4894Q8CA09 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm4894Q8CA09 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm4894Q8CA09 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm4894Q8CA09 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm4894Q8CA09 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm4894Q8CA09 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm4894Q8CA09 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm4894Q8CA09 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.25■□□□□ 0.67
Gm4894Q8CA09 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gm4894Q8CA09 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm4894Q8CA09 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm4894Q8CA09 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm4894Q8CA09 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm4894Q8CA09 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm4894Q8CA09 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm4894Q8CA09 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm4894Q8CA09 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Gm4894Q8CA09 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm4894Q8CA09 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm4894Q8CA09 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm4894Q8CA09 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm4894Q8CA09 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm4894Q8CA09 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm4894Q8CA09 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.21■□□□□ 0.67
Gm4894Q8CA09 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm4894Q8CA09 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Gm4894Q8CA09 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gm4894Q8CA09 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm4894Q8CA09 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4894Q8CA09 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gm4894Q8CA09 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4894Q8CA09 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4894Q8CA09 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4894Q8CA09 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4894Q8CA09 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4894Q8CA09 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4894Q8CA09 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gm4894Q8CA09 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4894Q8CA09 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4894Q8CA09 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4894Q8CA09 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4894Q8CA09 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gm4894Q8CA09 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4894Q8CA09 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4894Q8CA09 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm4894Q8CA09 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm4894Q8CA09 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm4894Q8CA09 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.13■□□□□ 0.65
Gm4894Q8CA09 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm4894Q8CA09 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm4894Q8CA09 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm4894Q8CA09 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Gm4894Q8CA09 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm4894Q8CA09 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm4894Q8CA09 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gm4894Q8CA09 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm4894Q8CA09 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm4894Q8CA09 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm4894Q8CA09 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.1■□□□□ 0.65
Gm4894Q8CA09 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm4894Q8CA09 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm4894Q8CA09 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm4894Q8CA09 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Gm4894Q8CA09 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
Gm4894Q8CA09 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Gm4894Q8CA09 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gm4894Q8CA09 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Gm4894Q8CA09 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm4894Q8CA09 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm4894Q8CA09 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm4894Q8CA09 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms