Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rtp1Q8C8C1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtp1Q8C8C1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.58■■■□□ 2.17
Rtp1Q8C8C1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtp1Q8C8C1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rtp1Q8C8C1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.53■■■□□ 2.16
Rtp1Q8C8C1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Rtp1Q8C8C1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.52■■■□□ 2.16
Rtp1Q8C8C1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rtp1Q8C8C1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.5■■■□□ 2.15
Rtp1Q8C8C1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rtp1Q8C8C1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rtp1Q8C8C1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Rtp1Q8C8C1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.49■■■□□ 2.15
Rtp1Q8C8C1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.49■■■□□ 2.15
Rtp1Q8C8C1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rtp1Q8C8C1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rtp1Q8C8C1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rtp1Q8C8C1 Gm6311-201ENSMUST00000073790 878 ntBASIC28.47■■■□□ 2.15
Rtp1Q8C8C1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Rtp1Q8C8C1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
Rtp1Q8C8C1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rtp1Q8C8C1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.44■■■□□ 2.14
Rtp1Q8C8C1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Rtp1Q8C8C1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Rtp1Q8C8C1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.43■■■□□ 2.14
Rtp1Q8C8C1 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.43■■■□□ 2.14
Rtp1Q8C8C1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Rtp1Q8C8C1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rtp1Q8C8C1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rtp1Q8C8C1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
Rtp1Q8C8C1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Rtp1Q8C8C1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rtp1Q8C8C1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Rtp1Q8C8C1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Rtp1Q8C8C1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Rtp1Q8C8C1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rtp1Q8C8C1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.37■■■□□ 2.13
Rtp1Q8C8C1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rtp1Q8C8C1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Rtp1Q8C8C1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rtp1Q8C8C1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.34■■■□□ 2.13
Rtp1Q8C8C1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.34■■■□□ 2.13
Rtp1Q8C8C1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.34■■■□□ 2.13
Rtp1Q8C8C1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rtp1Q8C8C1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.33■■■□□ 2.13
Rtp1Q8C8C1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Rtp1Q8C8C1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Rtp1Q8C8C1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.32■■■□□ 2.12
Rtp1Q8C8C1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Rtp1Q8C8C1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rtp1Q8C8C1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rtp1Q8C8C1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.3■■■□□ 2.12
Rtp1Q8C8C1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rtp1Q8C8C1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rtp1Q8C8C1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rtp1Q8C8C1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rtp1Q8C8C1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Rtp1Q8C8C1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.24■■■□□ 2.11
Rtp1Q8C8C1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Rtp1Q8C8C1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.24■■■□□ 2.11
Rtp1Q8C8C1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rtp1Q8C8C1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.24■■■□□ 2.11
Rtp1Q8C8C1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtp1Q8C8C1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtp1Q8C8C1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtp1Q8C8C1 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.2■■■□□ 2.11
Rtp1Q8C8C1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rtp1Q8C8C1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.2■■■□□ 2.1
Rtp1Q8C8C1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtp1Q8C8C1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Rtp1Q8C8C1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtp1Q8C8C1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.19■■■□□ 2.1
Rtp1Q8C8C1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.19■■■□□ 2.1
Rtp1Q8C8C1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Rtp1Q8C8C1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rtp1Q8C8C1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Rtp1Q8C8C1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rtp1Q8C8C1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.15■■■□□ 2.1
Rtp1Q8C8C1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Rtp1Q8C8C1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Rtp1Q8C8C1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rtp1Q8C8C1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Rtp1Q8C8C1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtp1Q8C8C1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtp1Q8C8C1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Rtp1Q8C8C1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtp1Q8C8C1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtp1Q8C8C1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Rtp1Q8C8C1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Rtp1Q8C8C1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Rtp1Q8C8C1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Rtp1Q8C8C1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
Rtp1Q8C8C1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rtp1Q8C8C1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rtp1Q8C8C1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rtp1Q8C8C1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rtp1Q8C8C1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rtp1Q8C8C1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Rtp1Q8C8C1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms