Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Scfd1Q8BRF7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Scfd1Q8BRF7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Scfd1Q8BRF7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Scfd1Q8BRF7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Scfd1Q8BRF7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Scfd1Q8BRF7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Scfd1Q8BRF7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scfd1Q8BRF7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scfd1Q8BRF7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.13
Scfd1Q8BRF7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Scfd1Q8BRF7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Scfd1Q8BRF7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Scfd1Q8BRF7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Scfd1Q8BRF7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.37■■■□□ 2.13
Scfd1Q8BRF7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Scfd1Q8BRF7 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.36■■■□□ 2.13
Scfd1Q8BRF7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.35■■■□□ 2.13
Scfd1Q8BRF7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Scfd1Q8BRF7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.34■■■□□ 2.13
Scfd1Q8BRF7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Scfd1Q8BRF7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.32■■■□□ 2.12
Scfd1Q8BRF7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
Scfd1Q8BRF7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Scfd1Q8BRF7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Scfd1Q8BRF7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Scfd1Q8BRF7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Scfd1Q8BRF7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.27■■■□□ 2.12
Scfd1Q8BRF7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.26■■■□□ 2.11
Scfd1Q8BRF7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.25■■■□□ 2.11
Scfd1Q8BRF7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Scfd1Q8BRF7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Scfd1Q8BRF7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.24■■■□□ 2.11
Scfd1Q8BRF7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Scfd1Q8BRF7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.24■■■□□ 2.11
Scfd1Q8BRF7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
Scfd1Q8BRF7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Scfd1Q8BRF7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.23■■■□□ 2.11
Scfd1Q8BRF7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
Scfd1Q8BRF7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Scfd1Q8BRF7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Scfd1Q8BRF7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Scfd1Q8BRF7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Scfd1Q8BRF7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.21■■■□□ 2.11
Scfd1Q8BRF7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Scfd1Q8BRF7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Scfd1Q8BRF7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Scfd1Q8BRF7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Scfd1Q8BRF7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.17■■■□□ 2.1
Scfd1Q8BRF7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Scfd1Q8BRF7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Scfd1Q8BRF7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.16■■■□□ 2.1
Scfd1Q8BRF7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Scfd1Q8BRF7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Scfd1Q8BRF7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.16■■■□□ 2.1
Scfd1Q8BRF7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Scfd1Q8BRF7 Gm7432-201ENSMUST00000210343 879 ntBASIC28.15■■■□□ 2.1
Scfd1Q8BRF7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Scfd1Q8BRF7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Scfd1Q8BRF7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Scfd1Q8BRF7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
Scfd1Q8BRF7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.13■■■□□ 2.09
Scfd1Q8BRF7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Scfd1Q8BRF7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.12■■■□□ 2.09
Scfd1Q8BRF7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Scfd1Q8BRF7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Scfd1Q8BRF7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.1■■■□□ 2.09
Scfd1Q8BRF7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Scfd1Q8BRF7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.09■■■□□ 2.09
Scfd1Q8BRF7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Scfd1Q8BRF7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.08■■■□□ 2.09
Scfd1Q8BRF7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Scfd1Q8BRF7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Scfd1Q8BRF7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Scfd1Q8BRF7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.06■■■□□ 2.08
Scfd1Q8BRF7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Scfd1Q8BRF7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
Scfd1Q8BRF7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Scfd1Q8BRF7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Scfd1Q8BRF7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Scfd1Q8BRF7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Scfd1Q8BRF7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Scfd1Q8BRF7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.03■■■□□ 2.08
Scfd1Q8BRF7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Scfd1Q8BRF7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Scfd1Q8BRF7 Zxda-201ENSMUST00000117281 2621 ntBASIC28.02■■■□□ 2.08
Scfd1Q8BRF7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.02■■■□□ 2.08
Scfd1Q8BRF7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Scfd1Q8BRF7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Scfd1Q8BRF7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Scfd1Q8BRF7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Scfd1Q8BRF7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Scfd1Q8BRF7 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.01■■■□□ 2.07
Scfd1Q8BRF7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Scfd1Q8BRF7 Gm30023-201ENSMUST00000197970 889 ntBASIC28■■■□□ 2.07
Scfd1Q8BRF7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.98■■■□□ 2.07
Scfd1Q8BRF7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.98■■■□□ 2.07
Scfd1Q8BRF7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.97■■■□□ 2.07
Scfd1Q8BRF7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Scfd1Q8BRF7 Gm11599-201ENSMUST00000118720 878 ntBASIC27.97■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms