Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Csnk1a1Q8BK63 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Csnk1a1Q8BK63 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.6■■□□□ 1.05
Csnk1a1Q8BK63 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Csnk1a1Q8BK63 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Csnk1a1Q8BK63 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Csnk1a1Q8BK63 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Csnk1a1Q8BK63 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Csnk1a1Q8BK63 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Csnk1a1Q8BK63 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Csnk1a1Q8BK63 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Csnk1a1Q8BK63 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Csnk1a1Q8BK63 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.56■■□□□ 1.04
Csnk1a1Q8BK63 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Csnk1a1Q8BK63 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.56■■□□□ 1.04
Csnk1a1Q8BK63 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Csnk1a1Q8BK63 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Csnk1a1Q8BK63 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Csnk1a1Q8BK63 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Csnk1a1Q8BK63 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Csnk1a1Q8BK63 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Csnk1a1Q8BK63 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Csnk1a1Q8BK63 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Csnk1a1Q8BK63 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Csnk1a1Q8BK63 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Csnk1a1Q8BK63 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Csnk1a1Q8BK63 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Csnk1a1Q8BK63 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
Csnk1a1Q8BK63 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Csnk1a1Q8BK63 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Csnk1a1Q8BK63 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Csnk1a1Q8BK63 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Csnk1a1Q8BK63 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Csnk1a1Q8BK63 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Csnk1a1Q8BK63 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Csnk1a1Q8BK63 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Csnk1a1Q8BK63 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Csnk1a1Q8BK63 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.48■■□□□ 1.03
Csnk1a1Q8BK63 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Csnk1a1Q8BK63 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Csnk1a1Q8BK63 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Csnk1a1Q8BK63 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Csnk1a1Q8BK63 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.45■■□□□ 1.02
Csnk1a1Q8BK63 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Csnk1a1Q8BK63 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.44■■□□□ 1.02
Csnk1a1Q8BK63 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Csnk1a1Q8BK63 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Csnk1a1Q8BK63 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Csnk1a1Q8BK63 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Csnk1a1Q8BK63 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.42■■□□□ 1.02
Csnk1a1Q8BK63 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Csnk1a1Q8BK63 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Csnk1a1Q8BK63 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.4■■□□□ 1.02
Csnk1a1Q8BK63 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Csnk1a1Q8BK63 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.4■■□□□ 1.02
Csnk1a1Q8BK63 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Csnk1a1Q8BK63 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Csnk1a1Q8BK63 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.38■■□□□ 1.01
Csnk1a1Q8BK63 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Csnk1a1Q8BK63 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Csnk1a1Q8BK63 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Csnk1a1Q8BK63 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Csnk1a1Q8BK63 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Csnk1a1Q8BK63 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Csnk1a1Q8BK63 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Csnk1a1Q8BK63 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Csnk1a1Q8BK63 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.35■■□□□ 1.01
Csnk1a1Q8BK63 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Csnk1a1Q8BK63 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Csnk1a1Q8BK63 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Csnk1a1Q8BK63 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Csnk1a1Q8BK63 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Csnk1a1Q8BK63 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.33■■□□□ 1
Csnk1a1Q8BK63 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Csnk1a1Q8BK63 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.32■■□□□ 1
Csnk1a1Q8BK63 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Csnk1a1Q8BK63 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Csnk1a1Q8BK63 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Csnk1a1Q8BK63 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Csnk1a1Q8BK63 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.29■■□□□ 1
Csnk1a1Q8BK63 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.28■■□□□ 1
Csnk1a1Q8BK63 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Csnk1a1Q8BK63 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Csnk1a1Q8BK63 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Csnk1a1Q8BK63 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.27■■□□□ 1
Csnk1a1Q8BK63 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Csnk1a1Q8BK63 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Csnk1a1Q8BK63 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Csnk1a1Q8BK63 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Csnk1a1Q8BK63 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Csnk1a1Q8BK63 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1a1Q8BK63 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1a1Q8BK63 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1a1Q8BK63 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1a1Q8BK63 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1a1Q8BK63 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1a1Q8BK63 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Csnk1a1Q8BK63 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csnk1a1Q8BK63 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csnk1a1Q8BK63 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms