Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh20Q8BIZ0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh20Q8BIZ0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdh20Q8BIZ0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh20Q8BIZ0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh20Q8BIZ0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.47■■□□□ 1.35
Pcdh20Q8BIZ0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.47■■□□□ 1.35
Pcdh20Q8BIZ0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh20Q8BIZ0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh20Q8BIZ0 Gm24970-201ENSMUST00000175582 82 ntBASIC23.46■■□□□ 1.35
Pcdh20Q8BIZ0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pcdh20Q8BIZ0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Pcdh20Q8BIZ0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdh20Q8BIZ0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.44■■□□□ 1.34
Pcdh20Q8BIZ0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdh20Q8BIZ0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdh20Q8BIZ0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Pcdh20Q8BIZ0 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.44■■□□□ 1.34
Pcdh20Q8BIZ0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdh20Q8BIZ0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdh20Q8BIZ0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Pcdh20Q8BIZ0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.42■■□□□ 1.34
Pcdh20Q8BIZ0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdh20Q8BIZ0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.41■■□□□ 1.34
Pcdh20Q8BIZ0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.41■■□□□ 1.34
Pcdh20Q8BIZ0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdh20Q8BIZ0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Pcdh20Q8BIZ0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdh20Q8BIZ0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdh20Q8BIZ0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.34
Pcdh20Q8BIZ0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Pcdh20Q8BIZ0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdh20Q8BIZ0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Pcdh20Q8BIZ0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdh20Q8BIZ0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdh20Q8BIZ0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdh20Q8BIZ0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdh20Q8BIZ0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdh20Q8BIZ0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdh20Q8BIZ0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdh20Q8BIZ0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.36■■□□□ 1.33
Pcdh20Q8BIZ0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdh20Q8BIZ0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdh20Q8BIZ0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdh20Q8BIZ0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdh20Q8BIZ0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdh20Q8BIZ0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdh20Q8BIZ0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdh20Q8BIZ0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdh20Q8BIZ0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Pcdh20Q8BIZ0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Pcdh20Q8BIZ0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh20Q8BIZ0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh20Q8BIZ0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.32■■□□□ 1.32
Pcdh20Q8BIZ0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh20Q8BIZ0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh20Q8BIZ0 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.31■■□□□ 1.32
Pcdh20Q8BIZ0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh20Q8BIZ0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh20Q8BIZ0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh20Q8BIZ0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh20Q8BIZ0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh20Q8BIZ0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh20Q8BIZ0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Pcdh20Q8BIZ0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdh20Q8BIZ0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdh20Q8BIZ0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdh20Q8BIZ0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Pcdh20Q8BIZ0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.27■■□□□ 1.31
Pcdh20Q8BIZ0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh20Q8BIZ0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh20Q8BIZ0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh20Q8BIZ0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Pcdh20Q8BIZ0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Pcdh20Q8BIZ0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh20Q8BIZ0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.23■■□□□ 1.31
Pcdh20Q8BIZ0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Pcdh20Q8BIZ0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.23■■□□□ 1.31
Pcdh20Q8BIZ0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh20Q8BIZ0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.23■■□□□ 1.31
Pcdh20Q8BIZ0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh20Q8BIZ0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh20Q8BIZ0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh20Q8BIZ0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Pcdh20Q8BIZ0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Pcdh20Q8BIZ0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh20Q8BIZ0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.21■■□□□ 1.31
Pcdh20Q8BIZ0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh20Q8BIZ0 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.2■■□□□ 1.3
Pcdh20Q8BIZ0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh20Q8BIZ0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh20Q8BIZ0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh20Q8BIZ0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh20Q8BIZ0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh20Q8BIZ0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh20Q8BIZ0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh20Q8BIZ0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Pcdh20Q8BIZ0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.17■■□□□ 1.3
Pcdh20Q8BIZ0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh20Q8BIZ0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms