Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Samm50Q8BGH2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
Samm50Q8BGH2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Samm50Q8BGH2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Samm50Q8BGH2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Samm50Q8BGH2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Samm50Q8BGH2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Samm50Q8BGH2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Samm50Q8BGH2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.27■■■□□ 2.12
Samm50Q8BGH2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.27■■■□□ 2.12
Samm50Q8BGH2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Samm50Q8BGH2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.26■■■□□ 2.11
Samm50Q8BGH2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Samm50Q8BGH2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Samm50Q8BGH2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
Samm50Q8BGH2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Samm50Q8BGH2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Gm24970-201ENSMUST00000175582 82 ntBASIC28.23■■■□□ 2.11
Samm50Q8BGH2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Samm50Q8BGH2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Samm50Q8BGH2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Samm50Q8BGH2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Samm50Q8BGH2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Samm50Q8BGH2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Samm50Q8BGH2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.18■■■□□ 2.1
Samm50Q8BGH2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.18■■■□□ 2.1
Samm50Q8BGH2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Samm50Q8BGH2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Samm50Q8BGH2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Samm50Q8BGH2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Samm50Q8BGH2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Samm50Q8BGH2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Samm50Q8BGH2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Samm50Q8BGH2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Samm50Q8BGH2 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.14■■■□□ 2.1
Samm50Q8BGH2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Samm50Q8BGH2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Samm50Q8BGH2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Samm50Q8BGH2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.13■■■□□ 2.09
Samm50Q8BGH2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Samm50Q8BGH2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Samm50Q8BGH2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28.11■■■□□ 2.09
Samm50Q8BGH2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Samm50Q8BGH2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Samm50Q8BGH2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Samm50Q8BGH2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Samm50Q8BGH2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Samm50Q8BGH2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Samm50Q8BGH2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Samm50Q8BGH2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Samm50Q8BGH2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Samm50Q8BGH2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Samm50Q8BGH2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Samm50Q8BGH2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.05■■■□□ 2.08
Samm50Q8BGH2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
Samm50Q8BGH2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
Samm50Q8BGH2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Samm50Q8BGH2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Samm50Q8BGH2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.02■■■□□ 2.08
Samm50Q8BGH2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
Samm50Q8BGH2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Samm50Q8BGH2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Samm50Q8BGH2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28■■■□□ 2.07
Samm50Q8BGH2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.99■■■□□ 2.07
Samm50Q8BGH2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Samm50Q8BGH2 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.98■■■□□ 2.07
Samm50Q8BGH2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Samm50Q8BGH2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Samm50Q8BGH2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Samm50Q8BGH2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Samm50Q8BGH2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Samm50Q8BGH2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Samm50Q8BGH2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Samm50Q8BGH2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Samm50Q8BGH2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Samm50Q8BGH2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.93■■■□□ 2.06
Samm50Q8BGH2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Samm50Q8BGH2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Samm50Q8BGH2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms