Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
Sptlc3Q8BG54 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Sptlc3Q8BG54 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Sptlc3Q8BG54 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Sptlc3Q8BG54 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.72■■■□□ 2.35
Sptlc3Q8BG54 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.72■■■□□ 2.35
Sptlc3Q8BG54 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.71■■■□□ 2.35
Sptlc3Q8BG54 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
Sptlc3Q8BG54 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.7■■■□□ 2.35
Sptlc3Q8BG54 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Sptlc3Q8BG54 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
Sptlc3Q8BG54 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Sptlc3Q8BG54 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Sptlc3Q8BG54 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Sptlc3Q8BG54 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Sptlc3Q8BG54 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Sptlc3Q8BG54 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Sptlc3Q8BG54 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.64■■■□□ 2.34
Sptlc3Q8BG54 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.64■■■□□ 2.34
Sptlc3Q8BG54 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.62■■■□□ 2.33
Sptlc3Q8BG54 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
Sptlc3Q8BG54 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Sptlc3Q8BG54 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Sptlc3Q8BG54 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.6■■■□□ 2.33
Sptlc3Q8BG54 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
Sptlc3Q8BG54 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Sptlc3Q8BG54 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Sptlc3Q8BG54 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Sptlc3Q8BG54 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Sptlc3Q8BG54 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Sptlc3Q8BG54 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Sptlc3Q8BG54 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.55■■■□□ 2.32
Sptlc3Q8BG54 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Sptlc3Q8BG54 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.54■■■□□ 2.32
Sptlc3Q8BG54 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.54■■■□□ 2.32
Sptlc3Q8BG54 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Sptlc3Q8BG54 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Sptlc3Q8BG54 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Sptlc3Q8BG54 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Sptlc3Q8BG54 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Sptlc3Q8BG54 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Sptlc3Q8BG54 Zxda-201ENSMUST00000117281 2621 ntBASIC29.53■■■□□ 2.32
Sptlc3Q8BG54 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.53■■■□□ 2.32
Sptlc3Q8BG54 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Sptlc3Q8BG54 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Sptlc3Q8BG54 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Sptlc3Q8BG54 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
Sptlc3Q8BG54 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
Sptlc3Q8BG54 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.5■■■□□ 2.31
Sptlc3Q8BG54 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Sptlc3Q8BG54 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Sptlc3Q8BG54 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
Sptlc3Q8BG54 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Sptlc3Q8BG54 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Sptlc3Q8BG54 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
Sptlc3Q8BG54 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.45■■■□□ 2.31
Sptlc3Q8BG54 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Sptlc3Q8BG54 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.45■■■□□ 2.3
Sptlc3Q8BG54 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.43■■■□□ 2.3
Sptlc3Q8BG54 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Sptlc3Q8BG54 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Sptlc3Q8BG54 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Sptlc3Q8BG54 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Sptlc3Q8BG54 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Sptlc3Q8BG54 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Sptlc3Q8BG54 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.42■■■□□ 2.3
Sptlc3Q8BG54 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Sptlc3Q8BG54 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Sptlc3Q8BG54 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Sptlc3Q8BG54 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Sptlc3Q8BG54 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.39■■■□□ 2.3
Sptlc3Q8BG54 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Sptlc3Q8BG54 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Sptlc3Q8BG54 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Sptlc3Q8BG54 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
Sptlc3Q8BG54 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Sptlc3Q8BG54 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Sptlc3Q8BG54 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Sptlc3Q8BG54 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
Sptlc3Q8BG54 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
Sptlc3Q8BG54 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.33■■■□□ 2.29
Sptlc3Q8BG54 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.32■■■□□ 2.28
Sptlc3Q8BG54 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Sptlc3Q8BG54 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Sptlc3Q8BG54 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Sptlc3Q8BG54 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29.3■■■□□ 2.28
Sptlc3Q8BG54 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.29■■■□□ 2.28
Sptlc3Q8BG54 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Sptlc3Q8BG54 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
Sptlc3Q8BG54 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Sptlc3Q8BG54 Gm30023-201ENSMUST00000197970 889 ntBASIC29.28■■■□□ 2.28
Sptlc3Q8BG54 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Sptlc3Q8BG54 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.28■■■□□ 2.28
Sptlc3Q8BG54 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Sptlc3Q8BG54 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Sptlc3Q8BG54 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Sptlc3Q8BG54 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Sptlc3Q8BG54 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.25■■■□□ 2.27
Sptlc3Q8BG54 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Sptlc3Q8BG54 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms