Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atpaf1Q811I0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atpaf1Q811I0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Atpaf1Q811I0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atpaf1Q811I0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atpaf1Q811I0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atpaf1Q811I0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atpaf1Q811I0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.78■□□□□ 0.76
Atpaf1Q811I0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.78■□□□□ 0.76
Atpaf1Q811I0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atpaf1Q811I0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atpaf1Q811I0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Atpaf1Q811I0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.75■□□□□ 0.75
Atpaf1Q811I0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atpaf1Q811I0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atpaf1Q811I0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atpaf1Q811I0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.73■□□□□ 0.75
Atpaf1Q811I0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atpaf1Q811I0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atpaf1Q811I0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Atpaf1Q811I0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atpaf1Q811I0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atpaf1Q811I0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atpaf1Q811I0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atpaf1Q811I0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atpaf1Q811I0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atpaf1Q811I0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atpaf1Q811I0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atpaf1Q811I0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atpaf1Q811I0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atpaf1Q811I0 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.69■□□□□ 0.74
Atpaf1Q811I0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atpaf1Q811I0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atpaf1Q811I0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atpaf1Q811I0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Atpaf1Q811I0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Atpaf1Q811I0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.68■□□□□ 0.74
Atpaf1Q811I0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atpaf1Q811I0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atpaf1Q811I0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atpaf1Q811I0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atpaf1Q811I0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atpaf1Q811I0 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.66■□□□□ 0.74
Atpaf1Q811I0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Atpaf1Q811I0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atpaf1Q811I0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atpaf1Q811I0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Atpaf1Q811I0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atpaf1Q811I0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atpaf1Q811I0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atpaf1Q811I0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atpaf1Q811I0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atpaf1Q811I0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atpaf1Q811I0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.62■□□□□ 0.73
Atpaf1Q811I0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atpaf1Q811I0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atpaf1Q811I0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atpaf1Q811I0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Atpaf1Q811I0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atpaf1Q811I0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atpaf1Q811I0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atpaf1Q811I0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atpaf1Q811I0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Atpaf1Q811I0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atpaf1Q811I0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atpaf1Q811I0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atpaf1Q811I0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Atpaf1Q811I0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Atpaf1Q811I0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atpaf1Q811I0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atpaf1Q811I0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atpaf1Q811I0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atpaf1Q811I0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.56■□□□□ 0.72
Atpaf1Q811I0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Atpaf1Q811I0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.55■□□□□ 0.72
Atpaf1Q811I0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atpaf1Q811I0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.54■□□□□ 0.72
Atpaf1Q811I0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atpaf1Q811I0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Atpaf1Q811I0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atpaf1Q811I0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atpaf1Q811I0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atpaf1Q811I0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atpaf1Q811I0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Atpaf1Q811I0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.53■□□□□ 0.72
Atpaf1Q811I0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atpaf1Q811I0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Atpaf1Q811I0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Atpaf1Q811I0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atpaf1Q811I0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atpaf1Q811I0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atpaf1Q811I0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atpaf1Q811I0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atpaf1Q811I0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atpaf1Q811I0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atpaf1Q811I0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atpaf1Q811I0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.49■□□□□ 0.71
Atpaf1Q811I0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Atpaf1Q811I0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atpaf1Q811I0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms