Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.99■■□□□ 1.11
Snrnp40Q6PE01 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.99■■□□□ 1.11
Snrnp40Q6PE01 Gm11175-201ENSMUST00000116172 543 ntBASIC21.98■■□□□ 1.11
Snrnp40Q6PE01 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Snrnp40Q6PE01 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Snrnp40Q6PE01 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.97■■□□□ 1.11
Snrnp40Q6PE01 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Snrnp40Q6PE01 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Snrnp40Q6PE01 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Snrnp40Q6PE01 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Snrnp40Q6PE01 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.95■■□□□ 1.1
Snrnp40Q6PE01 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Snrnp40Q6PE01 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Snrnp40Q6PE01 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.93■■□□□ 1.1
Snrnp40Q6PE01 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Snrnp40Q6PE01 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Snrnp40Q6PE01 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Snrnp40Q6PE01 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp40Q6PE01 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp40Q6PE01 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp40Q6PE01 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp40Q6PE01 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Snrnp40Q6PE01 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.88■■□□□ 1.09
Snrnp40Q6PE01 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Snrnp40Q6PE01 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Snrnp40Q6PE01 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Snrnp40Q6PE01 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Snrnp40Q6PE01 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Snrnp40Q6PE01 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Snrnp40Q6PE01 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp40Q6PE01 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp40Q6PE01 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp40Q6PE01 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp40Q6PE01 Cap2-205ENSMUST00000225824 1634 ntBASIC21.84■■□□□ 1.09
Snrnp40Q6PE01 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.84■■□□□ 1.09
Snrnp40Q6PE01 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Snrnp40Q6PE01 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Snrnp40Q6PE01 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.8■■□□□ 1.08
Snrnp40Q6PE01 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Snrnp40Q6PE01 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Snrnp40Q6PE01 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Snrnp40Q6PE01 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Snrnp40Q6PE01 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Snrnp40Q6PE01 Gm6311-201ENSMUST00000073790 878 ntBASIC21.77■■□□□ 1.08
Snrnp40Q6PE01 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.77■■□□□ 1.08
Snrnp40Q6PE01 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Snrnp40Q6PE01 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Snrnp40Q6PE01 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Snrnp40Q6PE01 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Snrnp40Q6PE01 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Snrnp40Q6PE01 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.73■■□□□ 1.07
Snrnp40Q6PE01 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.73■■□□□ 1.07
Snrnp40Q6PE01 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Snrnp40Q6PE01 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Snrnp40Q6PE01 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Snrnp40Q6PE01 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Snrnp40Q6PE01 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Snrnp40Q6PE01 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Snrnp40Q6PE01 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Snrnp40Q6PE01 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Snrnp40Q6PE01 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Snrnp40Q6PE01 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Snrnp40Q6PE01 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.7■■□□□ 1.06
Snrnp40Q6PE01 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.7■■□□□ 1.06
Snrnp40Q6PE01 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Snrnp40Q6PE01 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Snrnp40Q6PE01 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Snrnp40Q6PE01 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Snrnp40Q6PE01 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Snrnp40Q6PE01 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.69■■□□□ 1.06
Snrnp40Q6PE01 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.68■■□□□ 1.06
Snrnp40Q6PE01 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Snrnp40Q6PE01 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Snrnp40Q6PE01 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Snrnp40Q6PE01 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Snrnp40Q6PE01 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Snrnp40Q6PE01 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Snrnp40Q6PE01 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
Snrnp40Q6PE01 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.65■■□□□ 1.06
Snrnp40Q6PE01 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Snrnp40Q6PE01 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.64■■□□□ 1.05
Snrnp40Q6PE01 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Snrnp40Q6PE01 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.63■■□□□ 1.05
Snrnp40Q6PE01 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Snrnp40Q6PE01 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.62■■□□□ 1.05
Snrnp40Q6PE01 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Snrnp40Q6PE01 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp40Q6PE01 Particl-201ENSMUST00000205370 1560 ntBASIC21.61■■□□□ 1.05
Snrnp40Q6PE01 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Snrnp40Q6PE01 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.6■■□□□ 1.05
Snrnp40Q6PE01 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Snrnp40Q6PE01 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Snrnp40Q6PE01 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Snrnp40Q6PE01 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Snrnp40Q6PE01 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Snrnp40Q6PE01 Gm30023-201ENSMUST00000197970 889 ntBASIC21.58■■□□□ 1.05
Snrnp40Q6PE01 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Snrnp40Q6PE01 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Snrnp40Q6PE01 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Snrnp40Q6PE01 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms