Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VcanQ62059 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
VcanQ62059 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
VcanQ62059 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
VcanQ62059 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VcanQ62059 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
VcanQ62059 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VcanQ62059 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.74■■□□□ 1.39
VcanQ62059 Gm12366-201ENSMUST00000121722 873 ntBASIC23.74■■□□□ 1.39
VcanQ62059 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.74■■□□□ 1.39
VcanQ62059 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.74■■□□□ 1.39
VcanQ62059 Gm5786-201ENSMUST00000085368 882 ntBASIC23.74■■□□□ 1.39
VcanQ62059 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
VcanQ62059 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.74■■□□□ 1.39
VcanQ62059 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.73■■□□□ 1.39
VcanQ62059 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VcanQ62059 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VcanQ62059 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
VcanQ62059 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VcanQ62059 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.7■■□□□ 1.38
VcanQ62059 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VcanQ62059 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
VcanQ62059 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VcanQ62059 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VcanQ62059 Gm5812-201ENSMUST00000061073 957 ntBASIC23.68■■□□□ 1.38
VcanQ62059 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
VcanQ62059 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
VcanQ62059 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VcanQ62059 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.66■■□□□ 1.38
VcanQ62059 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
VcanQ62059 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
VcanQ62059 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VcanQ62059 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
VcanQ62059 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VcanQ62059 Gm4799-201ENSMUST00000095396 657 ntBASIC23.65■■□□□ 1.38
VcanQ62059 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
VcanQ62059 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.65■■□□□ 1.38
VcanQ62059 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VcanQ62059 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.65■■□□□ 1.38
VcanQ62059 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VcanQ62059 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VcanQ62059 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VcanQ62059 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.61■■□□□ 1.37
VcanQ62059 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VcanQ62059 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VcanQ62059 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VcanQ62059 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.58■■□□□ 1.37
VcanQ62059 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
VcanQ62059 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
VcanQ62059 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VcanQ62059 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VcanQ62059 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VcanQ62059 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VcanQ62059 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VcanQ62059 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.56■■□□□ 1.36
VcanQ62059 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VcanQ62059 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
VcanQ62059 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VcanQ62059 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VcanQ62059 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.54■■□□□ 1.36
VcanQ62059 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VcanQ62059 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VcanQ62059 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
VcanQ62059 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VcanQ62059 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VcanQ62059 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.51■■□□□ 1.35
VcanQ62059 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VcanQ62059 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VcanQ62059 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VcanQ62059 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VcanQ62059 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.5■■□□□ 1.35
VcanQ62059 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.49■■□□□ 1.35
VcanQ62059 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.49■■□□□ 1.35
VcanQ62059 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
VcanQ62059 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.47■■□□□ 1.35
VcanQ62059 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.47■■□□□ 1.35
VcanQ62059 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VcanQ62059 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VcanQ62059 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.47■■□□□ 1.35
VcanQ62059 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
VcanQ62059 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VcanQ62059 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VcanQ62059 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
VcanQ62059 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
VcanQ62059 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
VcanQ62059 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VcanQ62059 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.42■■□□□ 1.34
VcanQ62059 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.42■■□□□ 1.34
VcanQ62059 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VcanQ62059 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VcanQ62059 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VcanQ62059 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.39■■□□□ 1.34
VcanQ62059 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
VcanQ62059 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
VcanQ62059 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VcanQ62059 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VcanQ62059 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.37■■□□□ 1.33
VcanQ62059 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
VcanQ62059 Scarna2-201ENSMUST00000157560 414 ntBASIC23.35■■□□□ 1.33
VcanQ62059 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms