Protein–RNA interactions for Protein: Q61476

Cd55b, Complement decay-accelerating factor transmembrane isoform, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd55bQ61476 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cd55bQ61476 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.33■■□□□ 1.01
Cd55bQ61476 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cd55bQ61476 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.32■■□□□ 1
Cd55bQ61476 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd55bQ61476 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Cd55bQ61476 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cd55bQ61476 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cd55bQ61476 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.3■■□□□ 1
Cd55bQ61476 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd55bQ61476 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.28■■□□□ 1
Cd55bQ61476 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cd55bQ61476 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cd55bQ61476 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cd55bQ61476 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cd55bQ61476 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cd55bQ61476 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cd55bQ61476 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.27■□□□□ 0.99
Cd55bQ61476 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd55bQ61476 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd55bQ61476 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cd55bQ61476 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cd55bQ61476 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd55bQ61476 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd55bQ61476 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cd55bQ61476 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.24■□□□□ 0.99
Cd55bQ61476 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cd55bQ61476 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.24■□□□□ 0.99
Cd55bQ61476 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd55bQ61476 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd55bQ61476 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd55bQ61476 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.22■□□□□ 0.99
Cd55bQ61476 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd55bQ61476 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd55bQ61476 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd55bQ61476 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cd55bQ61476 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Cd55bQ61476 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd55bQ61476 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd55bQ61476 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cd55bQ61476 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cd55bQ61476 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd55bQ61476 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cd55bQ61476 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.16■□□□□ 0.98
Cd55bQ61476 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd55bQ61476 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd55bQ61476 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Cd55bQ61476 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Cd55bQ61476 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd55bQ61476 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd55bQ61476 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cd55bQ61476 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd55bQ61476 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd55bQ61476 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cd55bQ61476 Gm6821-201ENSMUST00000107540 542 ntBASIC21.14■□□□□ 0.97
Cd55bQ61476 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Cd55bQ61476 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cd55bQ61476 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd55bQ61476 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd55bQ61476 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd55bQ61476 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd55bQ61476 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.12■□□□□ 0.97
Cd55bQ61476 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd55bQ61476 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd55bQ61476 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.11■□□□□ 0.97
Cd55bQ61476 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Cd55bQ61476 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd55bQ61476 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd55bQ61476 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cd55bQ61476 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd55bQ61476 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd55bQ61476 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd55bQ61476 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cd55bQ61476 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.09■□□□□ 0.97
Cd55bQ61476 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd55bQ61476 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd55bQ61476 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.09■□□□□ 0.97
Cd55bQ61476 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd55bQ61476 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.08■□□□□ 0.97
Cd55bQ61476 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cd55bQ61476 Nkain2-201ENSMUST00000092602 558 ntBASIC21.08■□□□□ 0.97
Cd55bQ61476 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.07■□□□□ 0.96
Cd55bQ61476 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd55bQ61476 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd55bQ61476 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd55bQ61476 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cd55bQ61476 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cd55bQ61476 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd55bQ61476 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd55bQ61476 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Cd55bQ61476 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd55bQ61476 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.04■□□□□ 0.96
Cd55bQ61476 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cd55bQ61476 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd55bQ61476 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd55bQ61476 Gm8503-201ENSMUST00000118131 455 ntBASIC21.03■□□□□ 0.96
Cd55bQ61476 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cd55bQ61476 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cd55bQ61476 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cd55bQ61476 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms