Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Traf4Q61382 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Traf4Q61382 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Traf4Q61382 Gm8503-201ENSMUST00000118131 455 ntBASIC21.22■□□□□ 0.99
Traf4Q61382 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Traf4Q61382 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Traf4Q61382 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Traf4Q61382 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Traf4Q61382 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Traf4Q61382 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Traf4Q61382 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Traf4Q61382 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Traf4Q61382 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Traf4Q61382 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.19■□□□□ 0.98
Traf4Q61382 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Traf4Q61382 Gm6821-201ENSMUST00000107540 542 ntBASIC21.18■□□□□ 0.98
Traf4Q61382 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.16■□□□□ 0.98
Traf4Q61382 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.16■□□□□ 0.98
Traf4Q61382 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Traf4Q61382 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Traf4Q61382 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Traf4Q61382 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Traf4Q61382 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Traf4Q61382 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Traf4Q61382 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.14■□□□□ 0.97
Traf4Q61382 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.14■□□□□ 0.97
Traf4Q61382 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Traf4Q61382 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Traf4Q61382 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Traf4Q61382 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Traf4Q61382 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Traf4Q61382 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.13■□□□□ 0.97
Traf4Q61382 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Traf4Q61382 Amer2-203ENSMUST00000225247 2662 ntBASIC21.12■□□□□ 0.97
Traf4Q61382 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Traf4Q61382 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Traf4Q61382 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.1■□□□□ 0.97
Traf4Q61382 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Traf4Q61382 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.1■□□□□ 0.97
Traf4Q61382 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Traf4Q61382 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Traf4Q61382 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Traf4Q61382 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Traf4Q61382 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Traf4Q61382 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.09■□□□□ 0.97
Traf4Q61382 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Traf4Q61382 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Traf4Q61382 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.07■□□□□ 0.96
Traf4Q61382 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.07■□□□□ 0.96
Traf4Q61382 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Traf4Q61382 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Traf4Q61382 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Traf4Q61382 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Traf4Q61382 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Traf4Q61382 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Traf4Q61382 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Traf4Q61382 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Traf4Q61382 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Traf4Q61382 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Traf4Q61382 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Traf4Q61382 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Traf4Q61382 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.03■□□□□ 0.96
Traf4Q61382 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.03■□□□□ 0.96
Traf4Q61382 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Traf4Q61382 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.03■□□□□ 0.96
Traf4Q61382 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Traf4Q61382 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Traf4Q61382 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Traf4Q61382 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Traf4Q61382 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Traf4Q61382 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Traf4Q61382 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Traf4Q61382 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.99■□□□□ 0.95
Traf4Q61382 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Traf4Q61382 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Traf4Q61382 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Traf4Q61382 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Traf4Q61382 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Traf4Q61382 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Traf4Q61382 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Traf4Q61382 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Traf4Q61382 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Traf4Q61382 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Traf4Q61382 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Traf4Q61382 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Traf4Q61382 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Traf4Q61382 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Traf4Q61382 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.96■□□□□ 0.95
Traf4Q61382 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.96■□□□□ 0.95
Traf4Q61382 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Traf4Q61382 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Traf4Q61382 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Traf4Q61382 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Traf4Q61382 Nkain2-201ENSMUST00000092602 558 ntBASIC20.95■□□□□ 0.94
Traf4Q61382 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Traf4Q61382 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Traf4Q61382 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Traf4Q61382 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Traf4Q61382 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Traf4Q61382 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms