Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Six4Q61321 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Six4Q61321 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Six4Q61321 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Six4Q61321 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Six4Q61321 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Six4Q61321 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Six4Q61321 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Six4Q61321 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Six4Q61321 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Six4Q61321 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Six4Q61321 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Six4Q61321 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.86■■□□□ 1.57
Six4Q61321 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Six4Q61321 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.86■■□□□ 1.57
Six4Q61321 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Six4Q61321 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Six4Q61321 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Six4Q61321 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Six4Q61321 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Six4Q61321 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.82■■□□□ 1.56
Six4Q61321 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.82■■□□□ 1.56
Six4Q61321 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Six4Q61321 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Six4Q61321 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Six4Q61321 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Six4Q61321 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Six4Q61321 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.78■■□□□ 1.56
Six4Q61321 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.77■■□□□ 1.56
Six4Q61321 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Six4Q61321 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Six4Q61321 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Six4Q61321 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Six4Q61321 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Six4Q61321 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Six4Q61321 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.75■■□□□ 1.55
Six4Q61321 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Six4Q61321 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Six4Q61321 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Six4Q61321 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Six4Q61321 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Six4Q61321 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.72■■□□□ 1.55
Six4Q61321 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.72■■□□□ 1.55
Six4Q61321 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Six4Q61321 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Six4Q61321 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Six4Q61321 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Six4Q61321 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.7■■□□□ 1.54
Six4Q61321 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.69■■□□□ 1.54
Six4Q61321 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Six4Q61321 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Six4Q61321 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Six4Q61321 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Six4Q61321 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Six4Q61321 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Six4Q61321 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Six4Q61321 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Six4Q61321 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.64■■□□□ 1.54
Six4Q61321 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Six4Q61321 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.63■■□□□ 1.53
Six4Q61321 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.62■■□□□ 1.53
Six4Q61321 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Six4Q61321 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Six4Q61321 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.6■■□□□ 1.53
Six4Q61321 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Six4Q61321 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Six4Q61321 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Six4Q61321 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Six4Q61321 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Six4Q61321 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Six4Q61321 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Six4Q61321 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Six4Q61321 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Six4Q61321 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
Six4Q61321 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Six4Q61321 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Six4Q61321 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Six4Q61321 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Six4Q61321 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Six4Q61321 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.52■■□□□ 1.52
Six4Q61321 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Six4Q61321 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Six4Q61321 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Six4Q61321 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Six4Q61321 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Six4Q61321 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.46■■□□□ 1.51
Six4Q61321 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Six4Q61321 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Six4Q61321 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Six4Q61321 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.45■■□□□ 1.5
Six4Q61321 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Six4Q61321 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Six4Q61321 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Six4Q61321 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Six4Q61321 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Six4Q61321 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Six4Q61321 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.43■■□□□ 1.5
Six4Q61321 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Six4Q61321 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.42■■□□□ 1.5
Six4Q61321 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms