Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.67■■□□□ 1.7
FntaQ61239 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
FntaQ61239 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
FntaQ61239 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
FntaQ61239 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
FntaQ61239 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
FntaQ61239 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
FntaQ61239 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
FntaQ61239 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
FntaQ61239 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
FntaQ61239 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.63■■□□□ 1.69
FntaQ61239 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
FntaQ61239 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FntaQ61239 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
FntaQ61239 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
FntaQ61239 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
FntaQ61239 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
FntaQ61239 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
FntaQ61239 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.68
FntaQ61239 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
FntaQ61239 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
FntaQ61239 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
FntaQ61239 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
FntaQ61239 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.54■■□□□ 1.68
FntaQ61239 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FntaQ61239 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
FntaQ61239 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
FntaQ61239 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
FntaQ61239 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
FntaQ61239 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
FntaQ61239 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
FntaQ61239 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
FntaQ61239 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
FntaQ61239 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
FntaQ61239 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.46■■□□□ 1.67
FntaQ61239 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.46■■□□□ 1.67
FntaQ61239 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
FntaQ61239 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
FntaQ61239 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
FntaQ61239 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
FntaQ61239 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
FntaQ61239 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
FntaQ61239 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
FntaQ61239 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
FntaQ61239 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
FntaQ61239 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
FntaQ61239 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
FntaQ61239 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
FntaQ61239 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
FntaQ61239 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
FntaQ61239 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
FntaQ61239 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
FntaQ61239 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
FntaQ61239 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
FntaQ61239 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
FntaQ61239 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
FntaQ61239 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
FntaQ61239 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
FntaQ61239 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
FntaQ61239 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
FntaQ61239 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
FntaQ61239 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
FntaQ61239 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
FntaQ61239 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FntaQ61239 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FntaQ61239 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
FntaQ61239 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
FntaQ61239 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
FntaQ61239 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
FntaQ61239 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FntaQ61239 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
FntaQ61239 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
FntaQ61239 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FntaQ61239 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
FntaQ61239 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
FntaQ61239 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
FntaQ61239 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
FntaQ61239 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
FntaQ61239 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
FntaQ61239 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FntaQ61239 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
FntaQ61239 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FntaQ61239 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FntaQ61239 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
FntaQ61239 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
FntaQ61239 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
FntaQ61239 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FntaQ61239 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
FntaQ61239 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FntaQ61239 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
FntaQ61239 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
FntaQ61239 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
FntaQ61239 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
FntaQ61239 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FntaQ61239 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FntaQ61239 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
FntaQ61239 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FntaQ61239 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
FntaQ61239 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
FntaQ61239 Gm24804-201ENSMUST00000174982 85 ntBASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms