Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Scnn1aQ61180 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Scnn1aQ61180 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Scnn1aQ61180 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Scnn1aQ61180 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Scnn1aQ61180 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Scnn1aQ61180 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Scnn1aQ61180 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Scnn1aQ61180 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Scnn1aQ61180 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Scnn1aQ61180 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Scnn1aQ61180 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Scnn1aQ61180 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Scnn1aQ61180 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.6■■■□□ 2.17
Scnn1aQ61180 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Scnn1aQ61180 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Scnn1aQ61180 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Scnn1aQ61180 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Scnn1aQ61180 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Scnn1aQ61180 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.57■■■□□ 2.16
Scnn1aQ61180 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.57■■■□□ 2.16
Scnn1aQ61180 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Scnn1aQ61180 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.56■■■□□ 2.16
Scnn1aQ61180 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Scnn1aQ61180 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.53■■■□□ 2.16
Scnn1aQ61180 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.53■■■□□ 2.16
Scnn1aQ61180 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.52■■■□□ 2.16
Scnn1aQ61180 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Scnn1aQ61180 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Scnn1aQ61180 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.49■■■□□ 2.15
Scnn1aQ61180 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Scnn1aQ61180 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.48■■■□□ 2.15
Scnn1aQ61180 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Scnn1aQ61180 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
Scnn1aQ61180 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Scnn1aQ61180 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Scnn1aQ61180 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Scnn1aQ61180 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Scnn1aQ61180 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Scnn1aQ61180 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Scnn1aQ61180 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
Scnn1aQ61180 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.46■■■□□ 2.15
Scnn1aQ61180 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.46■■■□□ 2.15
Scnn1aQ61180 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Scnn1aQ61180 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Scnn1aQ61180 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.45■■■□□ 2.14
Scnn1aQ61180 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Scnn1aQ61180 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Scnn1aQ61180 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Scnn1aQ61180 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Scnn1aQ61180 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Scnn1aQ61180 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.41■■■□□ 2.14
Scnn1aQ61180 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scnn1aQ61180 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scnn1aQ61180 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Scnn1aQ61180 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.39■■■□□ 2.14
Scnn1aQ61180 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
Scnn1aQ61180 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Scnn1aQ61180 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Scnn1aQ61180 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.38■■■□□ 2.13
Scnn1aQ61180 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Scnn1aQ61180 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Scnn1aQ61180 Gm7432-201ENSMUST00000210343 879 ntBASIC28.36■■■□□ 2.13
Scnn1aQ61180 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Scnn1aQ61180 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.34■■■□□ 2.13
Scnn1aQ61180 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.34■■■□□ 2.13
Scnn1aQ61180 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.33■■■□□ 2.13
Scnn1aQ61180 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.33■■■□□ 2.13
Scnn1aQ61180 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Scnn1aQ61180 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.32■■■□□ 2.12
Scnn1aQ61180 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Scnn1aQ61180 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Scnn1aQ61180 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Scnn1aQ61180 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.29■■■□□ 2.12
Scnn1aQ61180 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Scnn1aQ61180 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Scnn1aQ61180 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Scnn1aQ61180 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Scnn1aQ61180 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Scnn1aQ61180 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Scnn1aQ61180 Zxda-201ENSMUST00000117281 2621 ntBASIC28.28■■■□□ 2.12
Scnn1aQ61180 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Scnn1aQ61180 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Scnn1aQ61180 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Scnn1aQ61180 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Scnn1aQ61180 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Scnn1aQ61180 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Scnn1aQ61180 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Scnn1aQ61180 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Scnn1aQ61180 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Scnn1aQ61180 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.25■■■□□ 2.11
Scnn1aQ61180 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Scnn1aQ61180 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.24■■■□□ 2.11
Scnn1aQ61180 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.24■■■□□ 2.11
Scnn1aQ61180 Gm30023-201ENSMUST00000197970 889 ntBASIC28.24■■■□□ 2.11
Scnn1aQ61180 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Scnn1aQ61180 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Scnn1aQ61180 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.23■■■□□ 2.11
Scnn1aQ61180 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Scnn1aQ61180 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms