Protein–RNA interactions for Protein: Q5TIS6

Noto, Homeobox protein notochord, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NotoQ5TIS6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NotoQ5TIS6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NotoQ5TIS6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NotoQ5TIS6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NotoQ5TIS6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NotoQ5TIS6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NotoQ5TIS6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NotoQ5TIS6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NotoQ5TIS6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NotoQ5TIS6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NotoQ5TIS6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.97■□□□□ 0.79
NotoQ5TIS6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NotoQ5TIS6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NotoQ5TIS6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NotoQ5TIS6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
NotoQ5TIS6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NotoQ5TIS6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
NotoQ5TIS6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
NotoQ5TIS6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NotoQ5TIS6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NotoQ5TIS6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NotoQ5TIS6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NotoQ5TIS6 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.93■□□□□ 0.78
NotoQ5TIS6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NotoQ5TIS6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NotoQ5TIS6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NotoQ5TIS6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NotoQ5TIS6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NotoQ5TIS6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NotoQ5TIS6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NotoQ5TIS6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NotoQ5TIS6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NotoQ5TIS6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.87■□□□□ 0.77
NotoQ5TIS6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NotoQ5TIS6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NotoQ5TIS6 Zfp131-205ENSMUST00000223812 663 ntBASIC19.86■□□□□ 0.77
NotoQ5TIS6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NotoQ5TIS6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NotoQ5TIS6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NotoQ5TIS6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NotoQ5TIS6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NotoQ5TIS6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.84■□□□□ 0.77
NotoQ5TIS6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NotoQ5TIS6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NotoQ5TIS6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NotoQ5TIS6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NotoQ5TIS6 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.81■□□□□ 0.76
NotoQ5TIS6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NotoQ5TIS6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NotoQ5TIS6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.79■□□□□ 0.76
NotoQ5TIS6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NotoQ5TIS6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NotoQ5TIS6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NotoQ5TIS6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.78■□□□□ 0.76
NotoQ5TIS6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NotoQ5TIS6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.78■□□□□ 0.76
NotoQ5TIS6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NotoQ5TIS6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NotoQ5TIS6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NotoQ5TIS6 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.77■□□□□ 0.76
NotoQ5TIS6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NotoQ5TIS6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NotoQ5TIS6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.76■□□□□ 0.75
NotoQ5TIS6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NotoQ5TIS6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NotoQ5TIS6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NotoQ5TIS6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NotoQ5TIS6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NotoQ5TIS6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NotoQ5TIS6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NotoQ5TIS6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
NotoQ5TIS6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NotoQ5TIS6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.73■□□□□ 0.75
NotoQ5TIS6 Gm24970-201ENSMUST00000175582 82 ntBASIC19.73■□□□□ 0.75
NotoQ5TIS6 Gm9397-201ENSMUST00000200125 605 ntBASIC19.73■□□□□ 0.75
NotoQ5TIS6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NotoQ5TIS6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NotoQ5TIS6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NotoQ5TIS6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NotoQ5TIS6 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.71■□□□□ 0.75
NotoQ5TIS6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NotoQ5TIS6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NotoQ5TIS6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.69■□□□□ 0.74
NotoQ5TIS6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NotoQ5TIS6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.68■□□□□ 0.74
NotoQ5TIS6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NotoQ5TIS6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NotoQ5TIS6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NotoQ5TIS6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.66■□□□□ 0.74
NotoQ5TIS6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.66■□□□□ 0.74
NotoQ5TIS6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NotoQ5TIS6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NotoQ5TIS6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NotoQ5TIS6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NotoQ5TIS6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NotoQ5TIS6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NotoQ5TIS6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NotoQ5TIS6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
NotoQ5TIS6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.64■□□□□ 0.73
NotoQ5TIS6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms