Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trav2Q5R1I9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav2Q5R1I9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav2Q5R1I9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav2Q5R1I9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav2Q5R1I9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav2Q5R1I9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav2Q5R1I9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav2Q5R1I9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav2Q5R1I9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.4■□□□□ 0.7
Trav2Q5R1I9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Trav2Q5R1I9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav2Q5R1I9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav2Q5R1I9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav2Q5R1I9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav2Q5R1I9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav2Q5R1I9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav2Q5R1I9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav2Q5R1I9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav2Q5R1I9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav2Q5R1I9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav2Q5R1I9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav2Q5R1I9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav2Q5R1I9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.35■□□□□ 0.69
Trav2Q5R1I9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.34■□□□□ 0.69
Trav2Q5R1I9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav2Q5R1I9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav2Q5R1I9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav2Q5R1I9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav2Q5R1I9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav2Q5R1I9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav2Q5R1I9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav2Q5R1I9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trav2Q5R1I9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav2Q5R1I9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav2Q5R1I9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav2Q5R1I9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav2Q5R1I9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trav2Q5R1I9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav2Q5R1I9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav2Q5R1I9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav2Q5R1I9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav2Q5R1I9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.26■□□□□ 0.67
Trav2Q5R1I9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.26■□□□□ 0.67
Trav2Q5R1I9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.26■□□□□ 0.67
Trav2Q5R1I9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.26■□□□□ 0.67
Trav2Q5R1I9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav2Q5R1I9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trav2Q5R1I9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Trav2Q5R1I9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav2Q5R1I9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav2Q5R1I9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.24■□□□□ 0.67
Trav2Q5R1I9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav2Q5R1I9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav2Q5R1I9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav2Q5R1I9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trav2Q5R1I9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav2Q5R1I9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav2Q5R1I9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav2Q5R1I9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav2Q5R1I9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav2Q5R1I9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav2Q5R1I9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav2Q5R1I9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav2Q5R1I9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav2Q5R1I9 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.21■□□□□ 0.67
Trav2Q5R1I9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav2Q5R1I9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav2Q5R1I9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav2Q5R1I9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Trav2Q5R1I9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.19■□□□□ 0.66
Trav2Q5R1I9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trav2Q5R1I9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.19■□□□□ 0.66
Trav2Q5R1I9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav2Q5R1I9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trav2Q5R1I9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trav2Q5R1I9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.18■□□□□ 0.66
Trav2Q5R1I9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.18■□□□□ 0.66
Trav2Q5R1I9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav2Q5R1I9 Gm7432-201ENSMUST00000210343 879 ntBASIC19.17■□□□□ 0.66
Trav2Q5R1I9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav2Q5R1I9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.17■□□□□ 0.66
Trav2Q5R1I9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav2Q5R1I9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav2Q5R1I9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.16■□□□□ 0.66
Trav2Q5R1I9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trav2Q5R1I9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav2Q5R1I9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav2Q5R1I9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav2Q5R1I9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav2Q5R1I9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav2Q5R1I9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Trav2Q5R1I9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav2Q5R1I9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav2Q5R1I9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav2Q5R1I9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav2Q5R1I9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav2Q5R1I9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav2Q5R1I9 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.11■□□□□ 0.65
Trav2Q5R1I9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms