Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7d-3Q5R1I1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7d-3Q5R1I1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7d-3Q5R1I1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav7d-3Q5R1I1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7d-3Q5R1I1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav7d-3Q5R1I1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7d-3Q5R1I1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav7d-3Q5R1I1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7d-3Q5R1I1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav7d-3Q5R1I1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7d-3Q5R1I1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7d-3Q5R1I1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7d-3Q5R1I1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7d-3Q5R1I1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7d-3Q5R1I1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.61■□□□□ 0.41
Trav7d-3Q5R1I1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Trav7d-3Q5R1I1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav7d-3Q5R1I1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trav7d-3Q5R1I1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav7d-3Q5R1I1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7d-3Q5R1I1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7d-3Q5R1I1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7d-3Q5R1I1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7d-3Q5R1I1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7d-3Q5R1I1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7d-3Q5R1I1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7d-3Q5R1I1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.59■□□□□ 0.41
Trav7d-3Q5R1I1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav7d-3Q5R1I1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7d-3Q5R1I1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7d-3Q5R1I1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav7d-3Q5R1I1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7d-3Q5R1I1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7d-3Q5R1I1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7d-3Q5R1I1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav7d-3Q5R1I1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7d-3Q5R1I1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7d-3Q5R1I1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7d-3Q5R1I1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7d-3Q5R1I1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7d-3Q5R1I1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7d-3Q5R1I1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7d-3Q5R1I1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7d-3Q5R1I1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7d-3Q5R1I1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7d-3Q5R1I1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7d-3Q5R1I1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7d-3Q5R1I1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7d-3Q5R1I1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7d-3Q5R1I1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7d-3Q5R1I1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7d-3Q5R1I1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav7d-3Q5R1I1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7d-3Q5R1I1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7d-3Q5R1I1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav7d-3Q5R1I1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7d-3Q5R1I1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7d-3Q5R1I1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7d-3Q5R1I1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7d-3Q5R1I1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7d-3Q5R1I1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7d-3Q5R1I1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7d-3Q5R1I1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7d-3Q5R1I1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7d-3Q5R1I1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7d-3Q5R1I1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.52■□□□□ 0.39
Trav7d-3Q5R1I1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7d-3Q5R1I1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7d-3Q5R1I1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7d-3Q5R1I1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7d-3Q5R1I1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Trav7d-3Q5R1I1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7d-3Q5R1I1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7d-3Q5R1I1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7d-3Q5R1I1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7d-3Q5R1I1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7d-3Q5R1I1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7d-3Q5R1I1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7d-3Q5R1I1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7d-3Q5R1I1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7d-3Q5R1I1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7d-3Q5R1I1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav7d-3Q5R1I1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7d-3Q5R1I1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.46■□□□□ 0.39
Trav7d-3Q5R1I1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7d-3Q5R1I1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav7d-3Q5R1I1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav7d-3Q5R1I1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Trav7d-3Q5R1I1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7d-3Q5R1I1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7d-3Q5R1I1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav7d-3Q5R1I1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trav7d-3Q5R1I1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7d-3Q5R1I1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7d-3Q5R1I1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7d-3Q5R1I1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7d-3Q5R1I1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav7d-3Q5R1I1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav7d-3Q5R1I1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms