Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
R3hdm4Q4VBF2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
R3hdm4Q4VBF2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.62■■□□□ 1.85
R3hdm4Q4VBF2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
R3hdm4Q4VBF2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
R3hdm4Q4VBF2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.6■■□□□ 1.85
R3hdm4Q4VBF2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
R3hdm4Q4VBF2 Amer2-203ENSMUST00000225247 2662 ntBASIC26.6■■□□□ 1.85
R3hdm4Q4VBF2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
R3hdm4Q4VBF2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
R3hdm4Q4VBF2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.59■■□□□ 1.85
R3hdm4Q4VBF2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
R3hdm4Q4VBF2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
R3hdm4Q4VBF2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
R3hdm4Q4VBF2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
R3hdm4Q4VBF2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
R3hdm4Q4VBF2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
R3hdm4Q4VBF2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
R3hdm4Q4VBF2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
R3hdm4Q4VBF2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
R3hdm4Q4VBF2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
R3hdm4Q4VBF2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
R3hdm4Q4VBF2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
R3hdm4Q4VBF2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
R3hdm4Q4VBF2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
R3hdm4Q4VBF2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
R3hdm4Q4VBF2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
R3hdm4Q4VBF2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.53■■□□□ 1.84
R3hdm4Q4VBF2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
R3hdm4Q4VBF2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
R3hdm4Q4VBF2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
R3hdm4Q4VBF2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.5■■□□□ 1.83
R3hdm4Q4VBF2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
R3hdm4Q4VBF2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
R3hdm4Q4VBF2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
R3hdm4Q4VBF2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
R3hdm4Q4VBF2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
R3hdm4Q4VBF2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.47■■□□□ 1.83
R3hdm4Q4VBF2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
R3hdm4Q4VBF2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
R3hdm4Q4VBF2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
R3hdm4Q4VBF2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.44■■□□□ 1.82
R3hdm4Q4VBF2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
R3hdm4Q4VBF2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
R3hdm4Q4VBF2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
R3hdm4Q4VBF2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
R3hdm4Q4VBF2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
R3hdm4Q4VBF2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
R3hdm4Q4VBF2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
R3hdm4Q4VBF2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
R3hdm4Q4VBF2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
R3hdm4Q4VBF2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.81
R3hdm4Q4VBF2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
R3hdm4Q4VBF2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
R3hdm4Q4VBF2 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.38■■□□□ 1.81
R3hdm4Q4VBF2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
R3hdm4Q4VBF2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
R3hdm4Q4VBF2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
R3hdm4Q4VBF2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
R3hdm4Q4VBF2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
R3hdm4Q4VBF2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.34■■□□□ 1.81
R3hdm4Q4VBF2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
R3hdm4Q4VBF2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.33■■□□□ 1.81
R3hdm4Q4VBF2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
R3hdm4Q4VBF2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
R3hdm4Q4VBF2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
R3hdm4Q4VBF2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
R3hdm4Q4VBF2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
R3hdm4Q4VBF2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.28■■□□□ 1.8
R3hdm4Q4VBF2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
R3hdm4Q4VBF2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
R3hdm4Q4VBF2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
R3hdm4Q4VBF2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
R3hdm4Q4VBF2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
R3hdm4Q4VBF2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.25■■□□□ 1.79
R3hdm4Q4VBF2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
R3hdm4Q4VBF2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
R3hdm4Q4VBF2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
R3hdm4Q4VBF2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
R3hdm4Q4VBF2 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.22■■□□□ 1.79
R3hdm4Q4VBF2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
R3hdm4Q4VBF2 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.2■■□□□ 1.78
R3hdm4Q4VBF2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
R3hdm4Q4VBF2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
R3hdm4Q4VBF2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
R3hdm4Q4VBF2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
R3hdm4Q4VBF2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
R3hdm4Q4VBF2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
R3hdm4Q4VBF2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
R3hdm4Q4VBF2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
R3hdm4Q4VBF2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.14■■□□□ 1.78
R3hdm4Q4VBF2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
R3hdm4Q4VBF2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.14■■□□□ 1.78
R3hdm4Q4VBF2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
R3hdm4Q4VBF2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
R3hdm4Q4VBF2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
R3hdm4Q4VBF2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.12■■□□□ 1.77
R3hdm4Q4VBF2 Nkain2-201ENSMUST00000092602 558 ntBASIC26.12■■□□□ 1.77
R3hdm4Q4VBF2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
R3hdm4Q4VBF2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms