Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Uspl1Q3ULM6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC32.11■■■□□ 2.73
Uspl1Q3ULM6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
Uspl1Q3ULM6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC32.11■■■□□ 2.73
Uspl1Q3ULM6 Amer2-203ENSMUST00000225247 2662 ntBASIC32.11■■■□□ 2.73
Uspl1Q3ULM6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Uspl1Q3ULM6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Uspl1Q3ULM6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Uspl1Q3ULM6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Uspl1Q3ULM6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC32.1■■■□□ 2.73
Uspl1Q3ULM6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Uspl1Q3ULM6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Uspl1Q3ULM6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Uspl1Q3ULM6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Uspl1Q3ULM6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Uspl1Q3ULM6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Uspl1Q3ULM6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Uspl1Q3ULM6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.02■■■□□ 2.72
Uspl1Q3ULM6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Uspl1Q3ULM6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC32.01■■■□□ 2.72
Uspl1Q3ULM6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Uspl1Q3ULM6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Uspl1Q3ULM6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Uspl1Q3ULM6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Uspl1Q3ULM6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Uspl1Q3ULM6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Uspl1Q3ULM6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.98■■■□□ 2.71
Uspl1Q3ULM6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Uspl1Q3ULM6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Uspl1Q3ULM6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Uspl1Q3ULM6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.97■■■□□ 2.71
Uspl1Q3ULM6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.96■■■□□ 2.71
Uspl1Q3ULM6 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.95■■■□□ 2.71
Uspl1Q3ULM6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Uspl1Q3ULM6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
Uspl1Q3ULM6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
Uspl1Q3ULM6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Uspl1Q3ULM6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
Uspl1Q3ULM6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.92■■■□□ 2.7
Uspl1Q3ULM6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Uspl1Q3ULM6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Uspl1Q3ULM6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Uspl1Q3ULM6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.91■■■□□ 2.7
Uspl1Q3ULM6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Uspl1Q3ULM6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Uspl1Q3ULM6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Uspl1Q3ULM6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.9■■■□□ 2.7
Uspl1Q3ULM6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Uspl1Q3ULM6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Uspl1Q3ULM6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Uspl1Q3ULM6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
Uspl1Q3ULM6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Uspl1Q3ULM6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
Uspl1Q3ULM6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.86■■■□□ 2.69
Uspl1Q3ULM6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Uspl1Q3ULM6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Uspl1Q3ULM6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Uspl1Q3ULM6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.79■■■□□ 2.68
Uspl1Q3ULM6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Uspl1Q3ULM6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Uspl1Q3ULM6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Uspl1Q3ULM6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Uspl1Q3ULM6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.76■■■□□ 2.67
Uspl1Q3ULM6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.76■■■□□ 2.67
Uspl1Q3ULM6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Uspl1Q3ULM6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
Uspl1Q3ULM6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Uspl1Q3ULM6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Uspl1Q3ULM6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Uspl1Q3ULM6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Uspl1Q3ULM6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Uspl1Q3ULM6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Uspl1Q3ULM6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Uspl1Q3ULM6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
Uspl1Q3ULM6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Uspl1Q3ULM6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Uspl1Q3ULM6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Uspl1Q3ULM6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Uspl1Q3ULM6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
Uspl1Q3ULM6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Uspl1Q3ULM6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Uspl1Q3ULM6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Uspl1Q3ULM6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Uspl1Q3ULM6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Uspl1Q3ULM6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.59■■■□□ 2.65
Uspl1Q3ULM6 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.59■■■□□ 2.65
Uspl1Q3ULM6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Uspl1Q3ULM6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.65
Uspl1Q3ULM6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
Uspl1Q3ULM6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.57■■■□□ 2.64
Uspl1Q3ULM6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Uspl1Q3ULM6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Uspl1Q3ULM6 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.56■■■□□ 2.64
Uspl1Q3ULM6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.56■■■□□ 2.64
Uspl1Q3ULM6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Uspl1Q3ULM6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Uspl1Q3ULM6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.54■■■□□ 2.64
Uspl1Q3ULM6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Uspl1Q3ULM6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Uspl1Q3ULM6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms