Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cks2P56390 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cks2P56390 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.14■□□□□ 0.81
Cks2P56390 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cks2P56390 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cks2P56390 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cks2P56390 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cks2P56390 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cks2P56390 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cks2P56390 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cks2P56390 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cks2P56390 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Cks2P56390 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cks2P56390 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cks2P56390 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cks2P56390 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cks2P56390 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cks2P56390 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cks2P56390 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cks2P56390 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cks2P56390 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cks2P56390 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cks2P56390 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.09■□□□□ 0.81
Cks2P56390 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cks2P56390 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cks2P56390 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cks2P56390 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cks2P56390 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.09■□□□□ 0.81
Cks2P56390 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cks2P56390 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cks2P56390 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cks2P56390 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cks2P56390 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cks2P56390 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cks2P56390 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cks2P56390 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cks2P56390 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cks2P56390 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cks2P56390 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cks2P56390 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cks2P56390 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.05■□□□□ 0.8
Cks2P56390 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cks2P56390 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Cks2P56390 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cks2P56390 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cks2P56390 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cks2P56390 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cks2P56390 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cks2P56390 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Cks2P56390 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cks2P56390 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cks2P56390 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.01■□□□□ 0.79
Cks2P56390 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cks2P56390 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cks2P56390 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cks2P56390 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cks2P56390 Gm16148-201ENSMUST00000119653 893 ntBASIC20■□□□□ 0.79
Cks2P56390 Gm24804-201ENSMUST00000174982 85 ntBASIC20■□□□□ 0.79
Cks2P56390 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cks2P56390 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cks2P56390 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cks2P56390 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cks2P56390 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cks2P56390 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.98■□□□□ 0.79
Cks2P56390 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cks2P56390 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cks2P56390 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cks2P56390 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cks2P56390 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.97■□□□□ 0.79
Cks2P56390 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cks2P56390 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cks2P56390 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cks2P56390 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cks2P56390 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cks2P56390 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cks2P56390 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cks2P56390 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cks2P56390 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cks2P56390 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cks2P56390 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Cks2P56390 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cks2P56390 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.94■□□□□ 0.78
Cks2P56390 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cks2P56390 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cks2P56390 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.93■□□□□ 0.78
Cks2P56390 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cks2P56390 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cks2P56390 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.92■□□□□ 0.78
Cks2P56390 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cks2P56390 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cks2P56390 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cks2P56390 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cks2P56390 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cks2P56390 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cks2P56390 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cks2P56390 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cks2P56390 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cks2P56390 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cks2P56390 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cks2P56390 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms