Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Ddx6P54823 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.27■■□□□ 1.64
Ddx6P54823 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ddx6P54823 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.25■■□□□ 1.63
Ddx6P54823 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx6P54823 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx6P54823 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.24■■□□□ 1.63
Ddx6P54823 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx6P54823 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx6P54823 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx6P54823 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx6P54823 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ddx6P54823 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Ddx6P54823 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx6P54823 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.17■■□□□ 1.62
Ddx6P54823 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Ddx6P54823 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx6P54823 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx6P54823 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.15■■□□□ 1.62
Ddx6P54823 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx6P54823 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx6P54823 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx6P54823 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.14■■□□□ 1.62
Ddx6P54823 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ddx6P54823 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ddx6P54823 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.12■■□□□ 1.61
Ddx6P54823 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx6P54823 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.12■■□□□ 1.61
Ddx6P54823 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.11■■□□□ 1.61
Ddx6P54823 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.11■■□□□ 1.61
Ddx6P54823 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.11■■□□□ 1.61
Ddx6P54823 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Ddx6P54823 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx6P54823 Gm11599-201ENSMUST00000118720 878 ntBASIC25.1■■□□□ 1.61
Ddx6P54823 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Ddx6P54823 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.09■■□□□ 1.61
Ddx6P54823 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx6P54823 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx6P54823 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ddx6P54823 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ddx6P54823 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Ddx6P54823 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ddx6P54823 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx6P54823 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.07■■□□□ 1.6
Ddx6P54823 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx6P54823 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx6P54823 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx6P54823 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.03■■□□□ 1.6
Ddx6P54823 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.01■■□□□ 1.59
Ddx6P54823 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Ddx6P54823 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx6P54823 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx6P54823 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ddx6P54823 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25■■□□□ 1.59
Ddx6P54823 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx6P54823 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25■■□□□ 1.59
Ddx6P54823 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx6P54823 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Ddx6P54823 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Ddx6P54823 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx6P54823 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx6P54823 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx6P54823 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx6P54823 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx6P54823 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.96■■□□□ 1.59
Ddx6P54823 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
Ddx6P54823 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx6P54823 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.95■■□□□ 1.58
Ddx6P54823 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx6P54823 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.94■■□□□ 1.58
Ddx6P54823 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx6P54823 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx6P54823 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx6P54823 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx6P54823 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx6P54823 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx6P54823 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx6P54823 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx6P54823 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.89■■□□□ 1.58
Ddx6P54823 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx6P54823 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.89■■□□□ 1.57
Ddx6P54823 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx6P54823 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx6P54823 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Ddx6P54823 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx6P54823 Gm30023-201ENSMUST00000197970 889 ntBASIC24.87■■□□□ 1.57
Ddx6P54823 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.87■■□□□ 1.57
Ddx6P54823 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Ddx6P54823 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx6P54823 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx6P54823 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.84■■□□□ 1.57
Ddx6P54823 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Ddx6P54823 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx6P54823 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx6P54823 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx6P54823 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx6P54823 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.82■■□□□ 1.56
Ddx6P54823 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx6P54823 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx6P54823 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms