Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmga2P52927 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmga2P52927 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmga2P52927 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.74■□□□□ 0.91
Hmga2P52927 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hmga2P52927 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hmga2P52927 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmga2P52927 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Hmga2P52927 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Hmga2P52927 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmga2P52927 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmga2P52927 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmga2P52927 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmga2P52927 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmga2P52927 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Hmga2P52927 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmga2P52927 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmga2P52927 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmga2P52927 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hmga2P52927 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.67■□□□□ 0.9
Hmga2P52927 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmga2P52927 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmga2P52927 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmga2P52927 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmga2P52927 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmga2P52927 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hmga2P52927 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hmga2P52927 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmga2P52927 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hmga2P52927 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmga2P52927 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmga2P52927 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmga2P52927 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmga2P52927 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga2P52927 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga2P52927 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmga2P52927 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga2P52927 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga2P52927 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga2P52927 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmga2P52927 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga2P52927 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga2P52927 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga2P52927 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmga2P52927 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmga2P52927 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.57■□□□□ 0.88
Hmga2P52927 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmga2P52927 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmga2P52927 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmga2P52927 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.55■□□□□ 0.88
Hmga2P52927 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmga2P52927 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hmga2P52927 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmga2P52927 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmga2P52927 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmga2P52927 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hmga2P52927 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmga2P52927 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmga2P52927 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Hmga2P52927 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.52■□□□□ 0.87
Hmga2P52927 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmga2P52927 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmga2P52927 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hmga2P52927 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmga2P52927 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmga2P52927 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga2P52927 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga2P52927 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga2P52927 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga2P52927 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga2P52927 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga2P52927 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga2P52927 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga2P52927 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga2P52927 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.47■□□□□ 0.87
Hmga2P52927 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga2P52927 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga2P52927 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga2P52927 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga2P52927 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga2P52927 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmga2P52927 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.45■□□□□ 0.86
Hmga2P52927 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.45■□□□□ 0.86
Hmga2P52927 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmga2P52927 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmga2P52927 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmga2P52927 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Hmga2P52927 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmga2P52927 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmga2P52927 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmga2P52927 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmga2P52927 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.42■□□□□ 0.86
Hmga2P52927 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hmga2P52927 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.41■□□□□ 0.86
Hmga2P52927 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hmga2P52927 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmga2P52927 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmga2P52927 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmga2P52927 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmga2P52927 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms