Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Cxcl12P40224 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.98■■□□□ 1.75
Cxcl12P40224 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.98■■□□□ 1.75
Cxcl12P40224 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Cxcl12P40224 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Cxcl12P40224 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cxcl12P40224 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.96■■□□□ 1.75
Cxcl12P40224 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cxcl12P40224 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
Cxcl12P40224 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Cxcl12P40224 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Cxcl12P40224 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cxcl12P40224 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cxcl12P40224 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cxcl12P40224 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.91■■□□□ 1.74
Cxcl12P40224 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.91■■□□□ 1.74
Cxcl12P40224 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.9■■□□□ 1.74
Cxcl12P40224 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cxcl12P40224 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Cxcl12P40224 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cxcl12P40224 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cxcl12P40224 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Cxcl12P40224 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cxcl12P40224 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cxcl12P40224 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cxcl12P40224 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cxcl12P40224 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Cxcl12P40224 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.86■■□□□ 1.73
Cxcl12P40224 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cxcl12P40224 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cxcl12P40224 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cxcl12P40224 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Cxcl12P40224 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.84■■□□□ 1.73
Cxcl12P40224 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.84■■□□□ 1.73
Cxcl12P40224 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.84■■□□□ 1.73
Cxcl12P40224 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.83■■□□□ 1.73
Cxcl12P40224 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cxcl12P40224 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cxcl12P40224 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Cxcl12P40224 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Cxcl12P40224 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Cxcl12P40224 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Cxcl12P40224 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Cxcl12P40224 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Cxcl12P40224 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.76■■□□□ 1.71
Cxcl12P40224 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.76■■□□□ 1.71
Cxcl12P40224 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.76■■□□□ 1.71
Cxcl12P40224 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.76■■□□□ 1.71
Cxcl12P40224 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cxcl12P40224 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cxcl12P40224 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Cxcl12P40224 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Cxcl12P40224 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cxcl12P40224 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cxcl12P40224 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.73■■□□□ 1.71
Cxcl12P40224 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Cxcl12P40224 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cxcl12P40224 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.71■■□□□ 1.71
Cxcl12P40224 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cxcl12P40224 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Cxcl12P40224 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Cxcl12P40224 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Cxcl12P40224 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cxcl12P40224 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cxcl12P40224 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Cxcl12P40224 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cxcl12P40224 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cxcl12P40224 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Cxcl12P40224 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cxcl12P40224 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Cxcl12P40224 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Cxcl12P40224 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cxcl12P40224 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cxcl12P40224 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cxcl12P40224 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cxcl12P40224 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cxcl12P40224 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cxcl12P40224 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cxcl12P40224 Particl-201ENSMUST00000205370 1560 ntBASIC25.6■■□□□ 1.69
Cxcl12P40224 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cxcl12P40224 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cxcl12P40224 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cxcl12P40224 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Cxcl12P40224 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cxcl12P40224 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Cxcl12P40224 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Cxcl12P40224 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.56■■□□□ 1.68
Cxcl12P40224 Scarna2-201ENSMUST00000157560 414 ntBASIC25.56■■□□□ 1.68
Cxcl12P40224 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cxcl12P40224 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.55■■□□□ 1.68
Cxcl12P40224 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cxcl12P40224 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Cxcl12P40224 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.54■■□□□ 1.68
Cxcl12P40224 Gm11687-201ENSMUST00000118911 886 ntBASIC25.54■■□□□ 1.68
Cxcl12P40224 Gm12366-201ENSMUST00000121722 873 ntBASIC25.54■■□□□ 1.68
Cxcl12P40224 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.54■■□□□ 1.68
Cxcl12P40224 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.54■■□□□ 1.68
Cxcl12P40224 Gm5786-201ENSMUST00000085368 882 ntBASIC25.54■■□□□ 1.68
Cxcl12P40224 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cxcl12P40224 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms