Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Timp3P39876 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Timp3P39876 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Timp3P39876 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Timp3P39876 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Timp3P39876 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Timp3P39876 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Timp3P39876 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Timp3P39876 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.72■□□□□ 0.75
Timp3P39876 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Timp3P39876 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Timp3P39876 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Timp3P39876 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Timp3P39876 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp3P39876 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Timp3P39876 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp3P39876 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp3P39876 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp3P39876 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp3P39876 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Timp3P39876 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Timp3P39876 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Timp3P39876 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Timp3P39876 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.69■□□□□ 0.74
Timp3P39876 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.69■□□□□ 0.74
Timp3P39876 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Timp3P39876 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Timp3P39876 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Timp3P39876 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Timp3P39876 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Timp3P39876 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Timp3P39876 Nkain2-201ENSMUST00000092602 558 ntBASIC19.66■□□□□ 0.74
Timp3P39876 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Timp3P39876 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.65■□□□□ 0.74
Timp3P39876 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Timp3P39876 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Timp3P39876 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Timp3P39876 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.64■□□□□ 0.73
Timp3P39876 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Timp3P39876 Amer2-203ENSMUST00000225247 2662 ntBASIC19.64■□□□□ 0.73
Timp3P39876 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Timp3P39876 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Timp3P39876 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.62■□□□□ 0.73
Timp3P39876 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Timp3P39876 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.62■□□□□ 0.73
Timp3P39876 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Timp3P39876 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Timp3P39876 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.61■□□□□ 0.73
Timp3P39876 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Timp3P39876 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Timp3P39876 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Timp3P39876 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Timp3P39876 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Timp3P39876 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.6■□□□□ 0.73
Timp3P39876 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Timp3P39876 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Timp3P39876 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Timp3P39876 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Timp3P39876 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.59■□□□□ 0.73
Timp3P39876 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Timp3P39876 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Timp3P39876 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Timp3P39876 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Timp3P39876 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Timp3P39876 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Timp3P39876 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Timp3P39876 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Timp3P39876 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Timp3P39876 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Timp3P39876 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Timp3P39876 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Timp3P39876 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.54■□□□□ 0.72
Timp3P39876 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Timp3P39876 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Timp3P39876 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Timp3P39876 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Timp3P39876 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.53■□□□□ 0.72
Timp3P39876 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Timp3P39876 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Timp3P39876 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.52■□□□□ 0.72
Timp3P39876 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Timp3P39876 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Timp3P39876 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Timp3P39876 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.51■□□□□ 0.71
Timp3P39876 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Timp3P39876 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Timp3P39876 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.51■□□□□ 0.71
Timp3P39876 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Timp3P39876 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Timp3P39876 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Timp3P39876 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Timp3P39876 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Timp3P39876 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Timp3P39876 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Timp3P39876 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Timp3P39876 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.48■□□□□ 0.71
Timp3P39876 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Timp3P39876 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Timp3P39876 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.47■□□□□ 0.71
Timp3P39876 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms