Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Foxa1P35582 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Foxa1P35582 Amer2-203ENSMUST00000225247 2662 ntBASIC22.62■■□□□ 1.21
Foxa1P35582 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Foxa1P35582 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.62■■□□□ 1.21
Foxa1P35582 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Foxa1P35582 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Foxa1P35582 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Foxa1P35582 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Foxa1P35582 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.61■■□□□ 1.21
Foxa1P35582 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Foxa1P35582 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Foxa1P35582 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Foxa1P35582 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Foxa1P35582 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
Foxa1P35582 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Foxa1P35582 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.59■■□□□ 1.21
Foxa1P35582 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Foxa1P35582 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Foxa1P35582 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Foxa1P35582 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Foxa1P35582 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Foxa1P35582 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Foxa1P35582 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Foxa1P35582 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.56■■□□□ 1.2
Foxa1P35582 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Foxa1P35582 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.54■■□□□ 1.2
Foxa1P35582 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Foxa1P35582 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Foxa1P35582 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.51■■□□□ 1.19
Foxa1P35582 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Foxa1P35582 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Foxa1P35582 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Foxa1P35582 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Foxa1P35582 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Foxa1P35582 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Foxa1P35582 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Foxa1P35582 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.48■■□□□ 1.19
Foxa1P35582 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.48■■□□□ 1.19
Foxa1P35582 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Foxa1P35582 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Foxa1P35582 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Foxa1P35582 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Foxa1P35582 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Foxa1P35582 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Foxa1P35582 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Foxa1P35582 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Foxa1P35582 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Foxa1P35582 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Foxa1P35582 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Foxa1P35582 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Foxa1P35582 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Foxa1P35582 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Foxa1P35582 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Foxa1P35582 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Foxa1P35582 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.43■■□□□ 1.18
Foxa1P35582 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Foxa1P35582 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Foxa1P35582 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.4■■□□□ 1.18
Foxa1P35582 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Foxa1P35582 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Foxa1P35582 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.4■■□□□ 1.18
Foxa1P35582 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Foxa1P35582 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Foxa1P35582 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.39■■□□□ 1.17
Foxa1P35582 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Foxa1P35582 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Foxa1P35582 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
Foxa1P35582 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
Foxa1P35582 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.37■■□□□ 1.17
Foxa1P35582 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Foxa1P35582 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Foxa1P35582 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Foxa1P35582 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Foxa1P35582 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Foxa1P35582 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Foxa1P35582 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Foxa1P35582 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxa1P35582 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Foxa1P35582 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxa1P35582 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxa1P35582 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxa1P35582 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Foxa1P35582 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Foxa1P35582 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxa1P35582 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.27■■□□□ 1.16
Foxa1P35582 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxa1P35582 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Foxa1P35582 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxa1P35582 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxa1P35582 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxa1P35582 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.24■■□□□ 1.15
Foxa1P35582 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxa1P35582 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Foxa1P35582 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxa1P35582 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxa1P35582 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.22■■□□□ 1.15
Foxa1P35582 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.22■■□□□ 1.15
Foxa1P35582 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Foxa1P35582 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms