Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf1aP25118 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.22■□□□□ 0.83
Tnfrsf1aP25118 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf1aP25118 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf1aP25118 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf1aP25118 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf1aP25118 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf1aP25118 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf1aP25118 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf1aP25118 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf1aP25118 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.17■□□□□ 0.82
Tnfrsf1aP25118 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf1aP25118 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf1aP25118 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf1aP25118 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf1aP25118 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf1aP25118 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf1aP25118 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf1aP25118 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf1aP25118 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf1aP25118 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf1aP25118 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf1aP25118 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.1■□□□□ 0.81
Tnfrsf1aP25118 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf1aP25118 Zfp131-205ENSMUST00000223812 663 ntBASIC20.1■□□□□ 0.81
Tnfrsf1aP25118 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tnfrsf1aP25118 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf1aP25118 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf1aP25118 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf1aP25118 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfrsf1aP25118 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfrsf1aP25118 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.07■□□□□ 0.8
Tnfrsf1aP25118 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.06■□□□□ 0.8
Tnfrsf1aP25118 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf1aP25118 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf1aP25118 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf1aP25118 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.04■□□□□ 0.8
Tnfrsf1aP25118 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.04■□□□□ 0.8
Tnfrsf1aP25118 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Tnfrsf1aP25118 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Tnfrsf1aP25118 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.03■□□□□ 0.8
Tnfrsf1aP25118 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf1aP25118 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf1aP25118 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf1aP25118 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Tnfrsf1aP25118 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1aP25118 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20■□□□□ 0.79
Tnfrsf1aP25118 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf1aP25118 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfrsf1aP25118 Gm9397-201ENSMUST00000200125 605 ntBASIC19.97■□□□□ 0.79
Tnfrsf1aP25118 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf1aP25118 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf1aP25118 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf1aP25118 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.95■□□□□ 0.78
Tnfrsf1aP25118 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf1aP25118 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf1aP25118 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Tnfrsf1aP25118 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf1aP25118 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf1aP25118 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Tnfrsf1aP25118 Gm24970-201ENSMUST00000175582 82 ntBASIC19.93■□□□□ 0.78
Tnfrsf1aP25118 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf1aP25118 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1aP25118 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1aP25118 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf1aP25118 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Tnfrsf1aP25118 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf1aP25118 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1aP25118 Gm45855-201ENSMUST00000212546 880 ntBASIC19.9■□□□□ 0.78
Tnfrsf1aP25118 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1aP25118 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf1aP25118 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms